| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863019
Identifier: 33863019
GI number: 33863019
Start: 815907
End: 816590
Strand: Direct
Name: 33863019
Synonym: PMT0747
Alternate gene names: NA
Gene position: 815907-816590 (Clockwise)
Preceding gene: 33863018
Following gene: 33863020
Centisome position: 33.84
GC content: 47.66
Gene sequence:
>684_bases ATGCCTGTGCTGAGATCAAGCCGCTTTCTCGGTGTTCTGATCAGCATCCTCCTGGGTCTGATTCTCCTTGTACCAGGAGC CTTTGCCATAACAACAGAAGATTTTCCTGTTGCAAGGCCTGAAGGCCATGTTTTCGATTCTGCTGATGTCCTAAGCAGAG TGTCTCGTTCTCAGATTGAAGGACGTCTTGTTGAGCTCGGAAACGAAAGACTTGATGCTCGCTTGATTACTCTTCGTAAA CTTGATTATGGTGTTTCCCTTTCCAACTTCGGTATTTCGCTGATCGATCGATGGTCCACAAACGCTGGTGAAAAAGAGCT GCCCCTGCTAGTGATGTTGATAGATGCACAAACCAAGCAAACTGTTGTCTTGGCAGATACAAGTTTAAGAAGCATATTAC CGGACGCCCTTTTGCAGAGCACTGGCCGTACGACAATGAATAAGCCAGTGGTGGGAGGCGAGCGCTACCAGCAAGCATCC TTTGAAGCAATTGCTCGCTTACAAGTTGTATTGGATGGAGGGGAAGACCCAGGACCTCCTATCGAAACGTTTAGCGCAAT TAAGGAAACCAATATCCCATCACAAGAACAAACACAAAGCAGTAATGCAACACTAGTGGTCGTTGTCTTGATGGTTGTAG GCACCATCGTTCCGATGGCCACTTGGTGGGTGTTCTCTCGCTGA
Upstream 100 bases:
>100_bases TTCTGATCGAGCAAGGATTGTGATTCAAGCAATTTCTGCTCTGAATCGAGACAGCTTGCTCAGCTGACGTCAGACTGCAA TATGAGCTGTTGTTGAACCG
Downstream 100 bases:
>100_bases CTCAATCACCATGACGCTTAGGGACTGGATGAGAACATTTGGGGAAGCTCGATCGATAGACATCAATAATGACCTTGAAC GTGGTTACGAAGCAGCACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MPVLRSSRFLGVLISILLGLILLVPGAFAITTEDFPVARPEGHVFDSADVLSRVSRSQIEGRLVELGNERLDARLITLRK LDYGVSLSNFGISLIDRWSTNAGEKELPLLVMLIDAQTKQTVVLADTSLRSILPDALLQSTGRTTMNKPVVGGERYQQAS FEAIARLQVVLDGGEDPGPPIETFSAIKETNIPSQEQTQSSNATLVVVVLMVVGTIVPMATWWVFSR
Sequences:
>Translated_227_residues MPVLRSSRFLGVLISILLGLILLVPGAFAITTEDFPVARPEGHVFDSADVLSRVSRSQIEGRLVELGNERLDARLITLRK LDYGVSLSNFGISLIDRWSTNAGEKELPLLVMLIDAQTKQTVVLADTSLRSILPDALLQSTGRTTMNKPVVGGERYQQAS FEAIARLQVVLDGGEDPGPPIETFSAIKETNIPSQEQTQSSNATLVVVVLMVVGTIVPMATWWVFSR >Mature_226_residues PVLRSSRFLGVLISILLGLILLVPGAFAITTEDFPVARPEGHVFDSADVLSRVSRSQIEGRLVELGNERLDARLITLRKL DYGVSLSNFGISLIDRWSTNAGEKELPLLVMLIDAQTKQTVVLADTSLRSILPDALLQSTGRTTMNKPVVGGERYQQASF EAIARLQVVLDGGEDPGPPIETFSAIKETNIPSQEQTQSSNATLVVVVLMVVGTIVPMATWWVFSR
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24743; Mature: 24612
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLRSSRFLGVLISILLGLILLVPGAFAITTEDFPVARPEGHVFDSADVLSRVSRSQIE CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH GRLVELGNERLDARLITLRKLDYGVSLSNFGISLIDRWSTNAGEKELPLLVMLIDAQTKQ HHHHHHCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHCCCCCCCCCCCEEEEEEECCCCC TVVLADTSLRSILPDALLQSTGRTTMNKPVVGGERYQQASFEAIARLQVVLDGGEDPGPP EEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCC IETFSAIKETNIPSQEQTQSSNATLVVVVLMVVGTIVPMATWWVFSR HHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PVLRSSRFLGVLISILLGLILLVPGAFAITTEDFPVARPEGHVFDSADVLSRVSRSQIE CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH GRLVELGNERLDARLITLRKLDYGVSLSNFGISLIDRWSTNAGEKELPLLVMLIDAQTKQ HHHHHHCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHCCCCCCCCCCCEEEEEEECCCCC TVVLADTSLRSILPDALLQSTGRTTMNKPVVGGERYQQASFEAIARLQVVLDGGEDPGPP EEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCC IETFSAIKETNIPSQEQTQSSNATLVVVVLMVVGTIVPMATWWVFSR HHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA