| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863007
Identifier: 33863007
GI number: 33863007
Start: 798986
End: 800731
Strand: Direct
Name: 33863007
Synonym: PMT0735
Alternate gene names: NA
Gene position: 798986-800731 (Clockwise)
Preceding gene: 33863006
Following gene: 33863008
Centisome position: 33.14
GC content: 42.44
Gene sequence:
>1746_bases GTGTTGGCTGGTGTGACTAGGTTTGAATTGACGAGTTGCTCTAGGCTCTCGCCGCTCAACGTAACAAATCCATCCGGCTT AAAGGTGTCACAGAAGATCTCATTACTAGTCTCATTAAGTCTCTCGACTCTTGCCTGTGAGAGTGGTTTCGCAAAACCAT CATGGTCATACGTGCCCTTAATGGCTGGACAGTCAGCACGTCCACTCAATGGAAGCTTTAATAAAGTTCCCGTTCTCCAC TCCAACCAGCCGGAGACAGTTGTTGGTTCAGGAATACTTGTTAATACAGCTCCGGGCTCAGCAGTAGTCGTCCGTACAGG GCAACAATTAAGAAATGCAGAATTTACCTTTGACGGCAAGTTCGGGATTCACATTCATCATAAGTATTATCCTCGCGACA GACGTAAACTTGGCAACAGCCGAAAACGTGGATTGCTTACTGTTGCAGCAATAGCAAACAATCCAACAGATTCATCAATT GAACTTAAATTTGATCGAGGTTCAGTTAAAAATAGTTTTGAGGCTCCTTATCATTCGAATAAACTTATGGGTGTGAAGCC CCTGGGACCTCGTCCCTGGAATACAGGTCCGGGGGATGCAACAGCTGTACAGATGCTGCGAGGTAAATTGGACAGAAAGT TAGCAGATAATATTGTCATTCCACCTCATACTAAAAAAATTGTATTCACAACACAAATACCTGCAAGAGGGATTGCCAAC GGACTGCTTAGTGGAACTAGCAACGGACCTTTTCAATTAGCTGTGGTTGCAGCAGAAGGGGCCACATCAGAAAAGAATCT GATCGCTATTCTTAATTCAAGGCGATTGGCGCCTGGACGTACTTATCTCAGTAGAATCGGTGAAATTGAAACGGGCAAGG TTTTTTCGCGTGTAGCAGGAGTAGCAATTGGTGATCACTATACCGCTAAACTAAATCATGACCTTAAACATGGTGCTCTT CATGTACCTCTTACCAGTACTCGTAAACATCATTTTGGCACAAGAGAGATCCAGGTCAACCGACTGGAAACTCGCATGAT TGATTCTGCCGTCAATAATGTAGGGACTTACGGGGTACGTTTTGATATCACCCTTAATCTAAAAGGCTCAGGCACTCATC AATTAGTTCTAAGCCACCCTGCAGCAACAGAAAAAAAGAAACCATTCACGGCATTTCGTGGTTCAATCGGAATCAAGACT GAGAATAAATACAAAGAAGTTCATGTAGGACTACGCTCAGGACAAAGTCTTCCTATATCTGACCTAGAGTTGACAGAAAA AAAGGATAATCCTGTTACTATTAGTTTAGTCTATCCTGCAGACAATACACCGGGGCATCTGCTAAGTGTTGTTCCAGTTG AACAGTATACTCAGGCTATGCAGAAAGAAGGAAAGGCAAAGAAAGTAAAGCTGCCTGTGACAGCAAGTAATAATTATAAT GCCCAACCATTAGCTCCAAAGCGTATAGCGAAAACAAAGGTTGTTGAGATGAACAGGAATTCGATGAAACAAAGACATCA AGACAATTACAAATTGAGCACAAACAAAAAGCAACTATTAACGAATGAATCCATTGGTCACAATTCTCCGGTCAACATGC CACCAATACTCATTTCCAATCCTAGTACAAATAATACTATGCCATCAGCAATTATCAATCCGCAAAGAGTCAATTCGAGC CTTAGAAAACACTACAACGAAGCCATAAAGGCACAACAGCAATGGTTGCATCAACTGCAAAACTAA
Upstream 100 bases:
>100_bases CAACATTTGAGCTGAGGCAAAAGGGAGAGAACATGCCGTTCCTACAGTTGGGTGAATCTTCGCGAAATTCTGCTAAGAGT GCGAAATTTCTTTCTTTGCG
Downstream 100 bases:
>100_bases TAGGCTACCAACAGCTGATCGGGTTCAAGTGAAAGCGTCCGAAGACAATTCGAGGCGACGGATTACCGTTGAACTACCAA ATCATCTAATCGCAAGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues MLAGVTRFELTSCSRLSPLNVTNPSGLKVSQKISLLVSLSLSTLACESGFAKPSWSYVPLMAGQSARPLNGSFNKVPVLH SNQPETVVGSGILVNTAPGSAVVVRTGQQLRNAEFTFDGKFGIHIHHKYYPRDRRKLGNSRKRGLLTVAAIANNPTDSSI ELKFDRGSVKNSFEAPYHSNKLMGVKPLGPRPWNTGPGDATAVQMLRGKLDRKLADNIVIPPHTKKIVFTTQIPARGIAN GLLSGTSNGPFQLAVVAAEGATSEKNLIAILNSRRLAPGRTYLSRIGEIETGKVFSRVAGVAIGDHYTAKLNHDLKHGAL HVPLTSTRKHHFGTREIQVNRLETRMIDSAVNNVGTYGVRFDITLNLKGSGTHQLVLSHPAATEKKKPFTAFRGSIGIKT ENKYKEVHVGLRSGQSLPISDLELTEKKDNPVTISLVYPADNTPGHLLSVVPVEQYTQAMQKEGKAKKVKLPVTASNNYN AQPLAPKRIAKTKVVEMNRNSMKQRHQDNYKLSTNKKQLLTNESIGHNSPVNMPPILISNPSTNNTMPSAIINPQRVNSS LRKHYNEAIKAQQQWLHQLQN
Sequences:
>Translated_581_residues MLAGVTRFELTSCSRLSPLNVTNPSGLKVSQKISLLVSLSLSTLACESGFAKPSWSYVPLMAGQSARPLNGSFNKVPVLH SNQPETVVGSGILVNTAPGSAVVVRTGQQLRNAEFTFDGKFGIHIHHKYYPRDRRKLGNSRKRGLLTVAAIANNPTDSSI ELKFDRGSVKNSFEAPYHSNKLMGVKPLGPRPWNTGPGDATAVQMLRGKLDRKLADNIVIPPHTKKIVFTTQIPARGIAN GLLSGTSNGPFQLAVVAAEGATSEKNLIAILNSRRLAPGRTYLSRIGEIETGKVFSRVAGVAIGDHYTAKLNHDLKHGAL HVPLTSTRKHHFGTREIQVNRLETRMIDSAVNNVGTYGVRFDITLNLKGSGTHQLVLSHPAATEKKKPFTAFRGSIGIKT ENKYKEVHVGLRSGQSLPISDLELTEKKDNPVTISLVYPADNTPGHLLSVVPVEQYTQAMQKEGKAKKVKLPVTASNNYN AQPLAPKRIAKTKVVEMNRNSMKQRHQDNYKLSTNKKQLLTNESIGHNSPVNMPPILISNPSTNNTMPSAIINPQRVNSS LRKHYNEAIKAQQQWLHQLQN >Mature_581_residues MLAGVTRFELTSCSRLSPLNVTNPSGLKVSQKISLLVSLSLSTLACESGFAKPSWSYVPLMAGQSARPLNGSFNKVPVLH SNQPETVVGSGILVNTAPGSAVVVRTGQQLRNAEFTFDGKFGIHIHHKYYPRDRRKLGNSRKRGLLTVAAIANNPTDSSI ELKFDRGSVKNSFEAPYHSNKLMGVKPLGPRPWNTGPGDATAVQMLRGKLDRKLADNIVIPPHTKKIVFTTQIPARGIAN GLLSGTSNGPFQLAVVAAEGATSEKNLIAILNSRRLAPGRTYLSRIGEIETGKVFSRVAGVAIGDHYTAKLNHDLKHGAL HVPLTSTRKHHFGTREIQVNRLETRMIDSAVNNVGTYGVRFDITLNLKGSGTHQLVLSHPAATEKKKPFTAFRGSIGIKT ENKYKEVHVGLRSGQSLPISDLELTEKKDNPVTISLVYPADNTPGHLLSVVPVEQYTQAMQKEGKAKKVKLPVTASNNYN AQPLAPKRIAKTKVVEMNRNSMKQRHQDNYKLSTNKKQLLTNESIGHNSPVNMPPILISNPSTNNTMPSAIINPQRVNSS LRKHYNEAIKAQQQWLHQLQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63563; Mature: 63563
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAGVTRFELTSCSRLSPLNVTNPSGLKVSQKISLLVSLSLSTLACESGFAKPSWSYVPL CCCCCEEEEECCCCCCCCCCCCCCCCCEEHHEEEEEEEECHHHHHHCCCCCCCCCCEEEE MAGQSARPLNGSFNKVPVLHSNQPETVVGSGILVNTAPGSAVVVRTGQQLRNAEFTFDGK ECCCCCCCCCCCCCEEEEEECCCCCEEEECCEEEECCCCCEEEEECCHHHCCCEEEECCE FGIHIHHKYYPRDRRKLGNSRKRGLLTVAAIANNPTDSSIELKFDRGSVKNSFEAPYHSN EEEEEEEEECCCHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCC KLMGVKPLGPRPWNTGPGDATAVQMLRGKLDRKLADNIVIPPHTKKIVFTTQIPARGIAN CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEECCCHHHHHH GLLSGTSNGPFQLAVVAAEGATSEKNLIAILNSRRLAPGRTYLSRIGEIETGKVFSRVAG HHHCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHC VAIGDHYTAKLNHDLKHGALHVPLTSTRKHHFGTREIQVNRLETRMIDSAVNNVGTYGVR EEECCCEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEEE FDITLNLKGSGTHQLVLSHPAATEKKKPFTAFRGSIGIKTENKYKEVHVGLRSGQSLPIS EEEEEEECCCCCEEEEEECCCCCCCCCCCHHHCCCEECCCCCCCEEEEEECCCCCCCCCC DLELTEKKDNPVTISLVYPADNTPGHLLSVVPVEQYTQAMQKEGKAKKVKLPVTASNNYN CCEEECCCCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEEEEEECCCCC AQPLAPKRIAKTKVVEMNRNSMKQRHQDNYKLSTNKKQLLTNESIGHNSPVNMPPILISN CCCCCHHHHHHEEEEECCHHHHHHHHCCCCEECCCHHHHEECCCCCCCCCCCCCCEEEEC PSTNNTMPSAIINPQRVNSSLRKHYNEAIKAQQQWLHQLQN CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLAGVTRFELTSCSRLSPLNVTNPSGLKVSQKISLLVSLSLSTLACESGFAKPSWSYVPL CCCCCEEEEECCCCCCCCCCCCCCCCCEEHHEEEEEEEECHHHHHHCCCCCCCCCCEEEE MAGQSARPLNGSFNKVPVLHSNQPETVVGSGILVNTAPGSAVVVRTGQQLRNAEFTFDGK ECCCCCCCCCCCCCEEEEEECCCCCEEEECCEEEECCCCCEEEEECCHHHCCCEEEECCE FGIHIHHKYYPRDRRKLGNSRKRGLLTVAAIANNPTDSSIELKFDRGSVKNSFEAPYHSN EEEEEEEEECCCHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCC KLMGVKPLGPRPWNTGPGDATAVQMLRGKLDRKLADNIVIPPHTKKIVFTTQIPARGIAN CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEECCCHHHHHH GLLSGTSNGPFQLAVVAAEGATSEKNLIAILNSRRLAPGRTYLSRIGEIETGKVFSRVAG HHHCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHC VAIGDHYTAKLNHDLKHGALHVPLTSTRKHHFGTREIQVNRLETRMIDSAVNNVGTYGVR EEECCCEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEEE FDITLNLKGSGTHQLVLSHPAATEKKKPFTAFRGSIGIKTENKYKEVHVGLRSGQSLPIS EEEEEEECCCCCEEEEEECCCCCCCCCCCHHHCCCEECCCCCCCEEEEEECCCCCCCCCC DLELTEKKDNPVTISLVYPADNTPGHLLSVVPVEQYTQAMQKEGKAKKVKLPVTASNNYN CCEEECCCCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEEEEEECCCCC AQPLAPKRIAKTKVVEMNRNSMKQRHQDNYKLSTNKKQLLTNESIGHNSPVNMPPILISN CCCCCHHHHHHEEEEECCHHHHHHHHCCCCEECCCHHHHEECCCCCCCCCCCCCCEEEEC PSTNNTMPSAIINPQRVNSSLRKHYNEAIKAQQQWLHQLQN CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA