| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863003
Identifier: 33863003
GI number: 33863003
Start: 796191
End: 797150
Strand: Direct
Name: 33863003
Synonym: PMT0731
Alternate gene names: NA
Gene position: 796191-797150 (Clockwise)
Preceding gene: 33863001
Following gene: 33863004
Centisome position: 33.03
GC content: 42.19
Gene sequence:
>960_bases GTGAAAAATCAAGGTCATAATCTTCTCAATTTTTCAAAAGTAATACTATCTTGTGGTCTCATCGTGGCTGTCATTAATAT CCTTCTAATCTCAATTCATAGTTTCCATCAAAGAACAGCAAGAAATCAACTTATGAACCTATTTCTGGAGGGTATGCAAG CCATAAAAGAAGACAAATCACTCTCAAAAAATTCGAAGAACGTTTCTTCGCAAACACCAACCTATTCTGCACTTCTCTCT TCTAAGGATGATGATTCCTTGTCTTTAGAGTTAAAAGTTGGTCTGATTAGCCAAAATCCACCAATACAAATAAAAATAAA GGATTTAGGGTTTTGTAAACTTCCCTCTGGGAGGCTTATTAACGAGCATACTCTAAATAATATGTTGAAGATAAAGAATA CTCAGATTGCTGATATCAAATGTTTTGCCACAACCAGTAGCGGCATCCTAGTCAACAATCAGCCTTATAGATCTAAAGTT TATTTAGTTAACCGGAGCAATGGCTGGATTGCGGTTAACCAACTCTCGCTTGAGGATTATGTCGCTTCTGTTGTTGGTGC TGAAATGCCCAGTCTTTGGAATATGGAGGCTCTTAAAGCTCAGGCGGTTGCTGCACGTTCTTATGCGCTTGCCCATATCG CAAGACCTGTGAACAAGGATTTCCATCTCGGTGACACCACCCGTTGGCAGGCATACCGAGGGATAGCAAGCCAAACATCA CGCTCTACGCAAGCAACTCAAGCCACCAAGGGAATTGTTCTTCGCTACAAGGGAGGAATTGTTGAAAGCCTTTATGCGTC AACGGCAGACATCAGTTTGCAAGCTCATGGCCACCTAGGAGCGAGCATGAGCCAGCATGGGGCCCAGAAATTGGCACGGA GTGGTTTGAAGTTCAATGAAATTCTTGCTAGGTATTACACAGGTGCTTCCCTAGCCAAACTACAAAGCCGTGGCAATTGA
Upstream 100 bases:
>100_bases GTTAAAAGGATTGACAGTTGCGCATTCAACTGCAAAAGTAATCTTATTAATTTATTTTTAATTTACCAATCAGGGCAAAT TCTAGGATTATAAATTTTCC
Downstream 100 bases:
>100_bases GCATTACTGGGATCAGGCGCTTGAACGCAGCACTGCAGCACAACTCAATGGTGCACTGGTACCTCTCAGCACCGAGCTCA CAAGAATTCGAGCACGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: H-34 [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKNQGHNLLNFSKVILSCGLIVAVINILLISIHSFHQRTARNQLMNLFLEGMQAIKEDKSLSKNSKNVSSQTPTYSALLS SKDDDSLSLELKVGLISQNPPIQIKIKDLGFCKLPSGRLINEHTLNNMLKIKNTQIADIKCFATTSSGILVNNQPYRSKV YLVNRSNGWIAVNQLSLEDYVASVVGAEMPSLWNMEALKAQAVAARSYALAHIARPVNKDFHLGDTTRWQAYRGIASQTS RSTQATQATKGIVLRYKGGIVESLYASTADISLQAHGHLGASMSQHGAQKLARSGLKFNEILARYYTGASLAKLQSRGN
Sequences:
>Translated_319_residues MKNQGHNLLNFSKVILSCGLIVAVINILLISIHSFHQRTARNQLMNLFLEGMQAIKEDKSLSKNSKNVSSQTPTYSALLS SKDDDSLSLELKVGLISQNPPIQIKIKDLGFCKLPSGRLINEHTLNNMLKIKNTQIADIKCFATTSSGILVNNQPYRSKV YLVNRSNGWIAVNQLSLEDYVASVVGAEMPSLWNMEALKAQAVAARSYALAHIARPVNKDFHLGDTTRWQAYRGIASQTS RSTQATQATKGIVLRYKGGIVESLYASTADISLQAHGHLGASMSQHGAQKLARSGLKFNEILARYYTGASLAKLQSRGN >Mature_319_residues MKNQGHNLLNFSKVILSCGLIVAVINILLISIHSFHQRTARNQLMNLFLEGMQAIKEDKSLSKNSKNVSSQTPTYSALLS SKDDDSLSLELKVGLISQNPPIQIKIKDLGFCKLPSGRLINEHTLNNMLKIKNTQIADIKCFATTSSGILVNNQPYRSKV YLVNRSNGWIAVNQLSLEDYVASVVGAEMPSLWNMEALKAQAVAARSYALAHIARPVNKDFHLGDTTRWQAYRGIASQTS RSTQATQATKGIVLRYKGGIVESLYASTADISLQAHGHLGASMSQHGAQKLARSGLKFNEILARYYTGASLAKLQSRGN
Specific function: Might be involved in sporulation [H]
COG id: COG2385
COG function: function code D; Sporulation protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013486 - InterPro: IPR013693 [H]
Pfam domain/function: PF08486 SpoIID [H]
EC number: NA
Molecular weight: Translated: 34972; Mature: 34972
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNQGHNLLNFSKVILSCGLIVAVINILLISIHSFHQRTARNQLMNLFLEGMQAIKEDKS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSKNSKNVSSQTPTYSALLSSKDDDSLSLELKVGLISQNPPIQIKIKDLGFCKLPSGRLI HCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEEECCCCCEEEEEECCCEEECCCCCEE NEHTLNNMLKIKNTQIADIKCFATTSSGILVNNQPYRSKVYLVNRSNGWIAVNQLSLEDY CHHHHHHHEEECCCEEEEEEEEEECCCCEEECCCCCCEEEEEEECCCCEEEEEECCHHHH VASVVGAEMPSLWNMEALKAQAVAARSYALAHIARPVNKDFHLGDTTRWQAYRGIASQTS HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC RSTQATQATKGIVLRYKGGIVESLYASTADISLQAHGHLGASMSQHGAQKLARSGLKFNE CCHHHHHHHCCEEEEECCCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHH ILARYYTGASLAKLQSRGN HHHHHHCCHHHHHHHHCCC >Mature Secondary Structure MKNQGHNLLNFSKVILSCGLIVAVINILLISIHSFHQRTARNQLMNLFLEGMQAIKEDKS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSKNSKNVSSQTPTYSALLSSKDDDSLSLELKVGLISQNPPIQIKIKDLGFCKLPSGRLI HCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEEECCCCCEEEEEECCCEEECCCCCEE NEHTLNNMLKIKNTQIADIKCFATTSSGILVNNQPYRSKVYLVNRSNGWIAVNQLSLEDY CHHHHHHHEEECCCEEEEEEEEEECCCCEEECCCCCCEEEEEEECCCCEEEEEECCHHHH VASVVGAEMPSLWNMEALKAQAVAARSYALAHIARPVNKDFHLGDTTRWQAYRGIASQTS HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC RSTQATQATKGIVLRYKGGIVESLYASTADISLQAHGHLGASMSQHGAQKLARSGLKFNE CCHHHHHHHCCEEEEECCCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHH ILARYYTGASLAKLQSRGN HHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA