| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862997
Identifier: 33862997
GI number: 33862997
Start: 784369
End: 784956
Strand: Direct
Name: 33862997
Synonym: PMT0725
Alternate gene names: NA
Gene position: 784369-784956 (Clockwise)
Preceding gene: 33862996
Following gene: 33862998
Centisome position: 32.53
GC content: 46.77
Gene sequence:
>588_bases ATGACTTTTCCGCCCGAGGCATACCTGTGGTTTAAAACCCTCCACATTGTTGGGGTTGTGGTTTGGTTCGCCGGCCTTTT TTATCTTGTGCGCTTATTTATCTATCACGTGGAAGCCGCTGACTTGGAACCAACTGTCAAAAAAGCATTTGAAGAGCAAT ACACGCTGATGGAGCGTCGATTGGCAAATATAATCACCACTCCAGGGATGATTCTTGCCGTTTCCATGGCTGTTGGATTG CTAATCACCCAACCGAGTTGGCTTAATCAAGCTTGGATGCAAGCAAAGCTTGCTTTGGTGGCTGGGCTAATCGCCTACCA CATTTTCTGTTATCGGCTGATGGGTCAGTTGAATCGCGGGGAATGCAGCTGGAGCGGCCGTCAGCTTCGTGCCCTAAATG AACTTCCAACTTTATTCTTAGTGTTAGTAGTGATGCTGGTTGTCTTCAAAAACCAGTTTCCAACAGGTGCAGCTACTTGG TTGATCGTTGGCCTTGTACTGTTTATGGCCGCGTCAATTCAGTTTTATGCACGATGGAGACGATTAAGACTTAGCCGACA ATTGGAAAGCCCGCTAAATAATGGCTAA
Upstream 100 bases:
>100_bases TGAAGCCGATATTGCGTTGGAGGAGGTTGCCTGATCAAGACGGATCACTTTTTTTAACTCTCACTACTTGTTCATCTCAG CAGATTGCTAATTGTTATCC
Downstream 100 bases:
>100_bases TGTTCCTCATCCTCTAAGTGAAATCCTCTTGGGTGTTAGTTCTGAGAGTTGTCCAAATATTATGAATTTTCACTGTCATA CTATTTGCAGTGATGGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTFPPEAYLWFKTLHIVGVVVWFAGLFYLVRLFIYHVEAADLEPTVKKAFEEQYTLMERRLANIITTPGMILAVSMAVGL LITQPSWLNQAWMQAKLALVAGLIAYHIFCYRLMGQLNRGECSWSGRQLRALNELPTLFLVLVVMLVVFKNQFPTGAATW LIVGLVLFMAASIQFYARWRRLRLSRQLESPLNNG
Sequences:
>Translated_195_residues MTFPPEAYLWFKTLHIVGVVVWFAGLFYLVRLFIYHVEAADLEPTVKKAFEEQYTLMERRLANIITTPGMILAVSMAVGL LITQPSWLNQAWMQAKLALVAGLIAYHIFCYRLMGQLNRGECSWSGRQLRALNELPTLFLVLVVMLVVFKNQFPTGAATW LIVGLVLFMAASIQFYARWRRLRLSRQLESPLNNG >Mature_194_residues TFPPEAYLWFKTLHIVGVVVWFAGLFYLVRLFIYHVEAADLEPTVKKAFEEQYTLMERRLANIITTPGMILAVSMAVGLL ITQPSWLNQAWMQAKLALVAGLIAYHIFCYRLMGQLNRGECSWSGRQLRALNELPTLFLVLVVMLVVFKNQFPTGAATWL IVGLVLFMAASIQFYARWRRLRLSRQLESPLNNG
Specific function: Unknown
COG id: COG1981
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0093 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014351 - InterPro: IPR005265 [H]
Pfam domain/function: PF03653 UPF0093 [H]
EC number: NA
Molecular weight: Translated: 22342; Mature: 22211
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFPPEAYLWFKTLHIVGVVVWFAGLFYLVRLFIYHVEAADLEPTVKKAFEEQYTLMERR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LANIITTPGMILAVSMAVGLLITQPSWLNQAWMQAKLALVAGLIAYHIFCYRLMGQLNRG HHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ECSWSGRQLRALNELPTLFLVLVVMLVVFKNQFPTGAATWLIVGLVLFMAASIQFYARWR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RLRLSRQLESPLNNG HHHHHHHHHCCCCCC >Mature Secondary Structure TFPPEAYLWFKTLHIVGVVVWFAGLFYLVRLFIYHVEAADLEPTVKKAFEEQYTLMERR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LANIITTPGMILAVSMAVGLLITQPSWLNQAWMQAKLALVAGLIAYHIFCYRLMGQLNRG HHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ECSWSGRQLRALNELPTLFLVLVVMLVVFKNQFPTGAATWLIVGLVLFMAASIQFYARWR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RLRLSRQLESPLNNG HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]