| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is dfa1 [H]
Identifier: 33862995
GI number: 33862995
Start: 781836
End: 782342
Strand: Direct
Name: dfa1 [H]
Synonym: PMT0723
Alternate gene names: 33862995
Gene position: 781836-782342 (Clockwise)
Preceding gene: 33862992
Following gene: 33862996
Centisome position: 32.43
GC content: 50.1
Gene sequence:
>507_bases TTGGTAAATCTGATGAGATGCTCAATGACACTGGATCTAGAAGCGAAAAAGGTTTTGCTTCGCAAAATCCCCCATGGTCT TTTTATTTGTGGAGTCCGCGAAGGTGATGAAATCAACGGCTTTACAGCAAGTTGGGTGACCCAAGGGTCGTTCGAACCTC CCCTTGTTGTTATGGCAGTTCGATCAGAGGGAAGCAGTCATGGAATCATTGAGCGAACGAAGCATTTCTCGCTCAATGTG CTTCGGGCTGATCAGAAAGAACTTGCGGCAGTTTTCTTCAAGCCACAGTCGGCGATGGGAGGGCGCTTTGAGTCAGCCCC CTTTCGTTATGGCGAATTGGGTCTACCCCTACTAGAGGATGCTATTGGAGGGGTTGAGTGTGAACTTGTGGGCCAGGTCG TCCATGGTGATCACACTGTGTTCGTCGGAGAAGTGAAATCAGCCCATCTAAATCAGGATGGGGATGCGCTTAACCTCGCT TCAACGGGTTGGTCATACGGCGGTTGA
Upstream 100 bases:
>100_bases AGATGACCAAGCGTTAAAGGGTCAAAGCTGCCTGGGTAAAGGGCCCTCATGATCCAATCAAACCACTTCTGGATCCTATG CAGAGAGGTGCTGCTTAGAG
Downstream 100 bases:
>100_bases AAATAATTTGAGCAACGCTTCTCAGCGCACCATCCTTCTAAAGGATGAAAATAGACTTGAGCAAAGGCTTAAGGAGATTC CAGCTGAACCTGGTTGTTAT
Product: hypothetical protein
Products: NAD(+); reduced flavin [C]
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MVNLMRCSMTLDLEAKKVLLRKIPHGLFICGVREGDEINGFTASWVTQGSFEPPLVVMAVRSEGSSHGIIERTKHFSLNV LRADQKELAAVFFKPQSAMGGRFESAPFRYGELGLPLLEDAIGGVECELVGQVVHGDHTVFVGEVKSAHLNQDGDALNLA STGWSYGG
Sequences:
>Translated_168_residues MVNLMRCSMTLDLEAKKVLLRKIPHGLFICGVREGDEINGFTASWVTQGSFEPPLVVMAVRSEGSSHGIIERTKHFSLNV LRADQKELAAVFFKPQSAMGGRFESAPFRYGELGLPLLEDAIGGVECELVGQVVHGDHTVFVGEVKSAHLNQDGDALNLA STGWSYGG >Mature_168_residues MVNLMRCSMTLDLEAKKVLLRKIPHGLFICGVREGDEINGFTASWVTQGSFEPPLVVMAVRSEGSSHGIIERTKHFSLNV LRADQKELAAVFFKPQSAMGGRFESAPFRYGELGLPLLEDAIGGVECELVGQVVHGDHTVFVGEVKSAHLNQDGDALNLA STGWSYGG
Specific function: Mediates electron transfer from NADH to oxygen, reducing it to water. This modular protein has 3 redox cofactors, in other organisms the same activity requires 2 or 3 proteins [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR002563 - InterPro: IPR008254 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct; PF00753 Lactamase_B [H]
EC number: 1.6.8.- [C]
Molecular weight: Translated: 18202; Mature: 18202
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNLMRCSMTLDLEAKKVLLRKIPHGLFICGVREGDEINGFTASWVTQGSFEPPLVVMAV CCEEEEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEE RSEGSSHGIIERTKHFSLNVLRADQKELAAVFFKPQSAMGGRFESAPFRYGELGLPLLED ECCCCCCCCEEECCCEEEEEEECCHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCCHHHH AIGGVECELVGQVVHGDHTVFVGEVKSAHLNQDGDALNLASTGWSYGG HCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure MVNLMRCSMTLDLEAKKVLLRKIPHGLFICGVREGDEINGFTASWVTQGSFEPPLVVMAV CCEEEEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEE RSEGSSHGIIERTKHFSLNVLRADQKELAAVFFKPQSAMGGRFESAPFRYGELGLPLLED ECCCCCCCCEEECCCEEEEEEECCHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCCHHHH AIGGVECELVGQVVHGDHTVFVGEVKSAHLNQDGDALNLASTGWSYGG HCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; flavin [C]
Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]