| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862991
Identifier: 33862991
GI number: 33862991
Start: 778562
End: 779077
Strand: Direct
Name: 33862991
Synonym: PMT0719
Alternate gene names: NA
Gene position: 778562-779077 (Clockwise)
Preceding gene: 33862990
Following gene: 33862992
Centisome position: 32.29
GC content: 51.94
Gene sequence:
>516_bases ATGAGTCGCCAAACCCTTTTGAAACAATTCACCCCTATTGATGGGATTGCCGCAATCGTGGCACTCATCGCTCTGGGGGG TGTGTTGTGGAGTCCGAAGTTAAGTCATTCATTGGCCAGGGCCACAGGCGTCATGAGGCCTGTGAAGGTTTCTGTCGATG TTCGCAACGTGCCTACAGCTGAGCCAAATGCACTGATCGAAGCTGCATTGGCCCAGGGCAGCACCAGTATCGTTATTCGC AATCAGCCTGCCGGTTCACTGAAACTTAAGGGCATCGAAGACCTCAGAAGCAAGCTCGTGGCGGTCCAGCCAGACGGCTC TGTCGTCATCGCAATGGATCCCAATTTGGCTGCCAATAGTGTTCTTGATGCTCGCTTCATACTTGAAGGTGACGGCACAG TCTCCAAGACGGGAGTTGTGTTAGCTGGAACAAAACTCAAAATTGGCACACCAGTTGAGCTAGAGGGATCCAGCTATCGA ATCAACGGAACCGTGAGTGGTGTCAGTGTTCAATGA
Upstream 100 bases:
>100_bases AACAACAGTAATCAGTTCATTGTTTGCATCGCTTGAGAGACCAATGGTTGACTTGATCAATCGGATCGGTCTCCGTATGG TGCATCTCTGAAGAGTTTTT
Downstream 100 bases:
>100_bases GGATTCTCCCTGCATGTTCCAAGATCGCTAAGAGAAACCATTCTCAATTGTTGATCCGAATTCTTGGAGCTGGGGGAATC CTGATCGGTTCAAATGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSRQTLLKQFTPIDGIAAIVALIALGGVLWSPKLSHSLARATGVMRPVKVSVDVRNVPTAEPNALIEAALAQGSTSIVIR NQPAGSLKLKGIEDLRSKLVAVQPDGSVVIAMDPNLAANSVLDARFILEGDGTVSKTGVVLAGTKLKIGTPVELEGSSYR INGTVSGVSVQ
Sequences:
>Translated_171_residues MSRQTLLKQFTPIDGIAAIVALIALGGVLWSPKLSHSLARATGVMRPVKVSVDVRNVPTAEPNALIEAALAQGSTSIVIR NQPAGSLKLKGIEDLRSKLVAVQPDGSVVIAMDPNLAANSVLDARFILEGDGTVSKTGVVLAGTKLKIGTPVELEGSSYR INGTVSGVSVQ >Mature_170_residues SRQTLLKQFTPIDGIAAIVALIALGGVLWSPKLSHSLARATGVMRPVKVSVDVRNVPTAEPNALIEAALAQGSTSIVIRN QPAGSLKLKGIEDLRSKLVAVQPDGSVVIAMDPNLAANSVLDARFILEGDGTVSKTGVVLAGTKLKIGTPVELEGSSYRI NGTVSGVSVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17690; Mature: 17559
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQTLLKQFTPIDGIAAIVALIALGGVLWSPKLSHSLARATGVMRPVKVSVDVRNVPTA CCHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCEEEEEEEECCCCCC EPNALIEAALAQGSTSIVIRNQPAGSLKLKGIEDLRSKLVAVQPDGSVVIAMDPNLAANS CCHHHHHHHHHCCCEEEEEECCCCCCEEECCHHHHHHCEEEECCCCCEEEEECCCCCCCC VLDARFILEGDGTVSKTGVVLAGTKLKIGTPVELEGSSYRINGTVSGVSVQ EEEEEEEEECCCCCCCCCEEEECCEEECCCCEEECCCEEEEEEEEEEEEEC >Mature Secondary Structure SRQTLLKQFTPIDGIAAIVALIALGGVLWSPKLSHSLARATGVMRPVKVSVDVRNVPTA CHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCEEEEEEEECCCCCC EPNALIEAALAQGSTSIVIRNQPAGSLKLKGIEDLRSKLVAVQPDGSVVIAMDPNLAANS CCHHHHHHHHHCCCEEEEEECCCCCCEEECCHHHHHHCEEEECCCCCEEEEECCCCCCCC VLDARFILEGDGTVSKTGVVLAGTKLKIGTPVELEGSSYRINGTVSGVSVQ EEEEEEEEECCCCCCCCCEEEECCEEECCCCEEECCCEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA