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The map label for this gene is 33862895

Identifier: 33862895

GI number: 33862895

Start: 675950

End: 676318

Strand: Direct

Name: 33862895

Synonym: PMT0622

Alternate gene names: NA

Gene position: 675950-676318 (Clockwise)

Preceding gene: 33862887

Following gene: 33862898

Centisome position: 28.04

GC content: 44.72

Gene sequence:

>369_bases
TTGATTGAAGATCAAAAAAAGCTGCAGACAAAACTCGGAGTCAAACTCGCTGTTCCAATCAAAAGCGGCGATAGATCCCT
GATTGTTCCAAGTCTGCGCACTGCATGGATTCTTGATTGGCATCAAAACAACTCAGCTCAAACAATTGGCTTCATCTATA
GACCGACAACACCCTTTCCTGCTCATCCCACCAAGACAATCAAAATGGAGTGCTTTTGGAATTCGGGCTCGATTACACCA
CTAACAACATTGGCTCCACATGATTCAAGGTCTATGCACGGGGTGGCGTTGAAATCTGGGATTCATCCAACCGAAACATC
GATTGGAGAGCTTCTGCTGGTTTTACCGTCCAATTCTGATTCAAGCTAA

Upstream 100 bases:

>100_bases
CGGCATCGATTAGCCAGTGTTGAGCAAAGCGCTTGCGAGCGTGATGTCCGGAAAAGGCCATCCCTCAACTTTGCACCAAT
CTGTATAGAGGGCGACGCAA

Downstream 100 bases:

>100_bases
AAAAATCAACACAACCCTGTTGATCCATTGAGTTGCTTTTATTAGCAGCATCAATGTCAAGGTCGTCAATTTGAATCCAA
TCGAGTGTGTTTCGATATTG

Product: methyl-coenzyme M reductase alpha sub

Products: NA

Alternate protein names: Outer Membrane Autotransporter Barrel

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MIEDQKKLQTKLGVKLAVPIKSGDRSLIVPSLRTAWILDWHQNNSAQTIGFIYRPTTPFPAHPTKTIKMECFWNSGSITP
LTTLAPHDSRSMHGVALKSGIHPTETSIGELLLVLPSNSDSS

Sequences:

>Translated_122_residues
MIEDQKKLQTKLGVKLAVPIKSGDRSLIVPSLRTAWILDWHQNNSAQTIGFIYRPTTPFPAHPTKTIKMECFWNSGSITP
LTTLAPHDSRSMHGVALKSGIHPTETSIGELLLVLPSNSDSS
>Mature_122_residues
MIEDQKKLQTKLGVKLAVPIKSGDRSLIVPSLRTAWILDWHQNNSAQTIGFIYRPTTPFPAHPTKTIKMECFWNSGSITP
LTTLAPHDSRSMHGVALKSGIHPTETSIGELLLVLPSNSDSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13403; Mature: 13403

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEDQKKLQTKLGVKLAVPIKSGDRSLIVPSLRTAWILDWHQNNSAQTIGFIYRPTTPFP
CCCCHHHHHHHCCEEEEEEECCCCCEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCC
AHPTKTIKMECFWNSGSITPLTTLAPHDSRSMHGVALKSGIHPTETSIGELLLVLPSNSD
CCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCC
SS
CC
>Mature Secondary Structure
MIEDQKKLQTKLGVKLAVPIKSGDRSLIVPSLRTAWILDWHQNNSAQTIGFIYRPTTPFP
CCCCHHHHHHHCCEEEEEEECCCCCEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCC
AHPTKTIKMECFWNSGSITPLTTLAPHDSRSMHGVALKSGIHPTETSIGELLLVLPSNSD
CCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCC
SS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA