Click here to switch to the map view.

The map label for this gene is rpe/cbbE [H]

Identifier: 33862842

GI number: 33862842

Start: 623678

End: 624361

Strand: Direct

Name: rpe/cbbE [H]

Synonym: PMT0569

Alternate gene names: 33862842

Gene position: 623678-624361 (Clockwise)

Preceding gene: 33862836

Following gene: 33862850

Centisome position: 25.87

GC content: 53.07

Gene sequence:

>684_bases
ATGAGCACGAAGCCCCTGGTAATCGCCCCCTCGATCCTCTCTGCCGATTTCTCCCGCCTAGGAGAAGACGTGCAGGCTGT
AGATCAAGCCGGCGCAGACTGGATTCATGTGGATGTCATGGACGGCCGATTCGTGCCAAATATCACGATTGGTCCTCTGA
TCGTTGAAGCACTAAGGCCTGTGACCAGTAAGCCCCTAGATGTCCACTTGATGATCGTGGAACCAGAAAGGTATGTAGGA
GATTTCGCAAAAGCAGGTGCAGATCACATCTATGTGCAGGTTGAAGCCTGTCCACACCTTCACCGCAACCTTGCGCAAAT
CAAGGATCTCGGTAAGAAAGCAGGTGCAGTACTCAACCCAAGCACACCTCTGGACACCCTTGAGTACTGCCTGGAGCTAT
GTGATCTAGTCCTGATTATGAGCGTCAACCCAGGCTTTGGTGGGCAAAGCTTCATCGACAATCAAGTGCAAAAGATCCGC
GAGCTGCGTCGTATTTGCGACGAACAGGGTCTCGATCCCTGGATCGAAGTCGATGGAGGTATCAAGGCCGACAATGCCTG
GAAAGTGATCGAAGCTGGCGCCAATGCGATTGTGAGCGGGTCTGGCGTGTTCAATCAGCCCGACTACGCCGAAGCTATCC
GAGGCATCCGTAATAGCAAACGTCCTGAAGGTGTTGTGGTCTGA

Upstream 100 bases:

>100_bases
GTTCTCGGCTCTAAAGCGCTGCTCACTGTATCAGTGCCGGCAACAACGAGAATGCCCATACAGCCGATTCCTAGAATCGC
CCACTCCCTAACCCCGATCG

Downstream 100 bases:

>100_bases
AGTAATAGATGCAGCAATAACTGCATCTATTGCCTATTAGTCTTGTGGGGATTGTTGCTAATAAGAACAGATCAATATCA
CAAGATTAGGCTTCAAAGAA

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSTKPLVIAPSILSADFSRLGEDVQAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVTSKPLDVHLMIVEPERYVG
DFAKAGADHIYVQVEACPHLHRNLAQIKDLGKKAGAVLNPSTPLDTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIR
ELRRICDEQGLDPWIEVDGGIKADNAWKVIEAGANAIVSGSGVFNQPDYAEAIRGIRNSKRPEGVVV

Sequences:

>Translated_227_residues
MSTKPLVIAPSILSADFSRLGEDVQAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVTSKPLDVHLMIVEPERYVG
DFAKAGADHIYVQVEACPHLHRNLAQIKDLGKKAGAVLNPSTPLDTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIR
ELRRICDEQGLDPWIEVDGGIKADNAWKVIEAGANAIVSGSGVFNQPDYAEAIRGIRNSKRPEGVVV
>Mature_226_residues
STKPLVIAPSILSADFSRLGEDVQAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVTSKPLDVHLMIVEPERYVGD
FAKAGADHIYVQVEACPHLHRNLAQIKDLGKKAGAVLNPSTPLDTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIRE
LRRICDEQGLDPWIEVDGGIKADNAWKVIEAGANAIVSGSGVFNQPDYAEAIRGIRNSKRPEGVVV

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=213, Percent_Identity=39.906103286385, Blast_Score=149, Evalue=2e-36,
Organism=Homo sapiens, GI219879828, Length=213, Percent_Identity=38.0281690140845, Blast_Score=139, Evalue=2e-33,
Organism=Homo sapiens, GI24307923, Length=169, Percent_Identity=33.1360946745562, Blast_Score=87, Evalue=1e-17,
Organism=Escherichia coli, GI1789788, Length=216, Percent_Identity=51.8518518518518, Blast_Score=226, Evalue=1e-60,
Organism=Escherichia coli, GI1790523, Length=205, Percent_Identity=36.5853658536585, Blast_Score=157, Evalue=5e-40,
Organism=Escherichia coli, GI1790754, Length=204, Percent_Identity=31.8627450980392, Blast_Score=109, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17552948, Length=224, Percent_Identity=39.7321428571429, Blast_Score=155, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6322341, Length=230, Percent_Identity=39.1304347826087, Blast_Score=160, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24586301, Length=212, Percent_Identity=39.1509433962264, Blast_Score=149, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24674; Mature: 24542

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKPLVIAPSILSADFSRLGEDVQAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRP
CCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCHHHHHHHHHHH
VTSKPLDVHLMIVEPERYVGDFAKAGADHIYVQVEACPHLHRNLAQIKDLGKKAGAVLNP
CCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCC
STPLDTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIRELRRICDEQGLDPWIEVDGG
CCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
IKADNAWKVIEAGANAIVSGSGVFNQPDYAEAIRGIRNSKRPEGVVV
CCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
STKPLVIAPSILSADFSRLGEDVQAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRP
CCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCHHHHHHHHHHH
VTSKPLDVHLMIVEPERYVGDFAKAGADHIYVQVEACPHLHRNLAQIKDLGKKAGAVLNP
CCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCC
STPLDTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIRELRRICDEQGLDPWIEVDGG
CCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
IKADNAWKVIEAGANAIVSGSGVFNQPDYAEAIRGIRNSKRPEGVVV
CCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]