| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862797
Identifier: 33862797
GI number: 33862797
Start: 573048
End: 574214
Strand: Direct
Name: 33862797
Synonym: PMT0524
Alternate gene names: NA
Gene position: 573048-574214 (Clockwise)
Preceding gene: 33862796
Following gene: 33862798
Centisome position: 23.77
GC content: 53.98
Gene sequence:
>1167_bases ATGACTTGCCTGCTTGAGCTGCTCCTACTGCTGGGTCTTGGTGTGTTTTGGCTCGAACTGAGGCATCGCCTGAGGCCCGC CTCCCCTCTGAGCCTCAGGGCGCTCGACTTCAACGTCAAGCAAAGCAACTCTGATCTTGATGTAGAAATCTGGCTGGAGA TCAGCAACCCCCATCCGCGCATGGAAGTGATGGTGCCTGAGTTGCAAATTAACCCTGTTCTGCTTGGCAAAGCCGATCTA AGTGAAGTCAAGTTGAGCACAAAGATCACCCCATATCATCCAGATGAAAAGGCTCGCGATGATGGTTACTGGGCGGCCTA CATTGTCAAAGGCCACAAAAGCACGAGGGTGCAGGTGAACCTGCGCCTGCAGAACAGCAAAAGCAGCGATTTGAAAACCA GTGCTGACAGCATTTGGGTAGATGTCAACTGGGTGAACTACGGCCCCTTTGGTCGGCTGAAGCGTCGTCAAGGTGTCCTG GTGCCACTCCATCAGCCAGAACCTCTCCAACCCTCTGAAGTCAGCTTCCAAGCTGGCGATTGCTGTGAGGTGTTACCTCT GAAAACCCATTTGCTTGGCACCCTCGATAACACTGTTGAGATCTTGCGTGACTACGCCAAGCCGCATCTACGCCCCGGAG ATGTCCTCACGATCGGGGAAACCCCGGTGGCGATTATGCAAGGGCGCTATCACCACCCGAGCACAGTCAACCCTGGATGG CTCGCCCGGTTCCTTTGCCGAGCCTTTCATCCCACAAGCAGTCTTGCTACTGCTTGTGGGCTACAGAGCTTAATTAATCT GGTAGGGCCAACCAGAGTGCTACTGGCATGGATAGTTGGCCTAATTCTGAAAACGCTAGGTATCAAAGGAGGCTTCTATC GACTTGCTGGCGAACAGGCACGTCTAATTGATGACATCACAGGAACCACTCCTCCATACGATCAAACGATCGTGCTTGGG CCCCTCGCGCCAACAAAGCTCTGCAGACAAGCAGCCGCTGAGTTGGGAGTTGGCGTTGCCATCGTTGATGTCAATGATCT CGGCCGGGTCAAGGTTCTGGCCTCTAGTGATGGTTGCGATGAAACCCTTCTCAAGAAAGCTCTGCGTCCGAACCCAGCCG GTAATGCCAATGAACGCACGCCTCTGGTCTTGGTCCGACCCAATTGA
Upstream 100 bases:
>100_bases CTTCATGGTGAAAGAATAAGGCGCTAAAGTACTGCTATCAGCATCAACCACCCTTTACGCTGCGCGCCAGGTCCCCCGGT CTAGTAAGCCGGCTGCTCCA
Downstream 100 bases:
>100_bases CCACAATGGAAGACATGGTCAAGCTGGATAAGATTCAAATGAAGGCATTGGTCGAGGCGTGATCGAGGCATACAGCAGCC CCCTTCAGGTGATGTCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTCLLELLLLLGLGVFWLELRHRLRPASPLSLRALDFNVKQSNSDLDVEIWLEISNPHPRMEVMVPELQINPVLLGKADL SEVKLSTKITPYHPDEKARDDGYWAAYIVKGHKSTRVQVNLRLQNSKSSDLKTSADSIWVDVNWVNYGPFGRLKRRQGVL VPLHQPEPLQPSEVSFQAGDCCEVLPLKTHLLGTLDNTVEILRDYAKPHLRPGDVLTIGETPVAIMQGRYHHPSTVNPGW LARFLCRAFHPTSSLATACGLQSLINLVGPTRVLLAWIVGLILKTLGIKGGFYRLAGEQARLIDDITGTTPPYDQTIVLG PLAPTKLCRQAAAELGVGVAIVDVNDLGRVKVLASSDGCDETLLKKALRPNPAGNANERTPLVLVRPN
Sequences:
>Translated_388_residues MTCLLELLLLLGLGVFWLELRHRLRPASPLSLRALDFNVKQSNSDLDVEIWLEISNPHPRMEVMVPELQINPVLLGKADL SEVKLSTKITPYHPDEKARDDGYWAAYIVKGHKSTRVQVNLRLQNSKSSDLKTSADSIWVDVNWVNYGPFGRLKRRQGVL VPLHQPEPLQPSEVSFQAGDCCEVLPLKTHLLGTLDNTVEILRDYAKPHLRPGDVLTIGETPVAIMQGRYHHPSTVNPGW LARFLCRAFHPTSSLATACGLQSLINLVGPTRVLLAWIVGLILKTLGIKGGFYRLAGEQARLIDDITGTTPPYDQTIVLG PLAPTKLCRQAAAELGVGVAIVDVNDLGRVKVLASSDGCDETLLKKALRPNPAGNANERTPLVLVRPN >Mature_387_residues TCLLELLLLLGLGVFWLELRHRLRPASPLSLRALDFNVKQSNSDLDVEIWLEISNPHPRMEVMVPELQINPVLLGKADLS EVKLSTKITPYHPDEKARDDGYWAAYIVKGHKSTRVQVNLRLQNSKSSDLKTSADSIWVDVNWVNYGPFGRLKRRQGVLV PLHQPEPLQPSEVSFQAGDCCEVLPLKTHLLGTLDNTVEILRDYAKPHLRPGDVLTIGETPVAIMQGRYHHPSTVNPGWL ARFLCRAFHPTSSLATACGLQSLINLVGPTRVLLAWIVGLILKTLGIKGGFYRLAGEQARLIDDITGTTPPYDQTIVLGP LAPTKLCRQAAAELGVGVAIVDVNDLGRVKVLASSDGCDETLLKKALRPNPAGNANERTPLVLVRPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42734; Mature: 42603
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCLLELLLLLGLGVFWLELRHRLRPASPLSLRALDFNVKQSNSDLDVEIWLEISNPHPR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCC MEVMVPELQINPVLLGKADLSEVKLSTKITPYHPDEKARDDGYWAAYIVKGHKSTRVQVN EEEEECCEEECEEEECCCCHHHEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEE LRLQNSKSSDLKTSADSIWVDVNWVNYGPFGRLKRRQGVLVPLHQPEPLQPSEVSFQAGD EEEECCCCCCCCCCCCEEEEEEEEEEECCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCC CCEVLPLKTHLLGTLDNTVEILRDYAKPHLRPGDVLTIGETPVAIMQGRYHHPSTVNPGW CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCHHH LARFLCRAFHPTSSLATACGLQSLINLVGPTRVLLAWIVGLILKTLGIKGGFYRLAGEQA HHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHH RLIDDITGTTPPYDQTIVLGPLAPTKLCRQAAAELGVGVAIVDVNDLGRVKVLASSDGCD HHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCH ETLLKKALRPNPAGNANERTPLVLVRPN HHHHHHHHCCCCCCCCCCCCCEEEECCC >Mature Secondary Structure TCLLELLLLLGLGVFWLELRHRLRPASPLSLRALDFNVKQSNSDLDVEIWLEISNPHPR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCC MEVMVPELQINPVLLGKADLSEVKLSTKITPYHPDEKARDDGYWAAYIVKGHKSTRVQVN EEEEECCEEECEEEECCCCHHHEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEE LRLQNSKSSDLKTSADSIWVDVNWVNYGPFGRLKRRQGVLVPLHQPEPLQPSEVSFQAGD EEEECCCCCCCCCCCCEEEEEEEEEEECCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCC CCEVLPLKTHLLGTLDNTVEILRDYAKPHLRPGDVLTIGETPVAIMQGRYHHPSTVNPGW CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCHHH LARFLCRAFHPTSSLATACGLQSLINLVGPTRVLLAWIVGLILKTLGIKGGFYRLAGEQA HHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHH RLIDDITGTTPPYDQTIVLGPLAPTKLCRQAAAELGVGVAIVDVNDLGRVKVLASSDGCD HHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCH ETLLKKALRPNPAGNANERTPLVLVRPN HHHHHHHHCCCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA