| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862795
Identifier: 33862795
GI number: 33862795
Start: 570688
End: 572364
Strand: Direct
Name: 33862795
Synonym: PMT0522
Alternate gene names: NA
Gene position: 570688-572364 (Clockwise)
Preceding gene: 33862794
Following gene: 33862796
Centisome position: 23.67
GC content: 53.25
Gene sequence:
>1677_bases GTGGTGAATTTGGCGGACAGCACATCCACTCAGATCCTGTTGCTGGCTCCCGATCTGCTCGGTGAATCCTTAGCGTTGCA GCTCAGCAGTGCAAACCCAAACCTGGATGTCATTCTGCGGACGGACCAGCTGAGTCGTCATCCAGTCCTAGTGATCTTGT CGGTTGAGAGTCTCGAAACTCTCAGCACATTGCAACTGGAACTCAAAAGACTTCAGGAGCATTGGCAACCTGCGCCAGTA ATGCTGATCCTTCCGGCCCAGCTTCGTTTCAATGCAAACGAGTTGTTGAGCCTCGATTGTCCAGGCCTACTTCAAGACCC CGATCTGGCCACATTGCAGGCTGCTATCACCACTCTTTGTGGCGGTGGCAGAGTTGTGAGACTCAATGCTGCCCCCGACT CCCAAGACAGCATTCCCCAAGCAACGATGGGGCTTGGTCAGTGGCTGTTGGTGAGTGGTCTCCAGCAGATCGACAACGAT CTGAGGTTGATCGAAGCATTCCTCAACCCACCGCCCAAAAATGAACTGTTTCGTCTTTTGATGGAAGGGCGCCAGCGGGA ACTCCGTAGTGCAAGAGATTTTTTGTTATGGATTTGGGGCCCGCTGCAAGTGGGTCTACGCAACCCTGTCCTCCCAAATC GGCCATCCCAAAAGGCACGCATCAATTTCGATTTCGATGCTTCAAGACAGATCTCAGCAGAAGCTGCCGGAACGGTTATC TGCCTCAGTGAACGGAACGCAGTGGCGGTATGGGGAGCGATCCGTCAGCGGCTTAGCGATTCCGTAGAAAAAGGACTCAG AAATTCAACAGGCAGCCTGCTAGCGATTGAAAGCCTCAATCCTGAGCGACGTCGTGACCTACTCCTTGCCCTTTTGAACC AATTGGATCATGTGCTGAAAAAGCTGCGTCAACCCAACAGTACCGAGACCCCACTCAATGACTCCTGGCTGACGCTCGAA TCTGAACTACGTGAACAAGCCCTGCGATCTATGGCAGGTAATTACGTCAGACTTCCTCGAGGTGGTGAACTCAAACCAGT GGCAGATCAATTGCTTGCCACTGCCGATCTCAAGGGAATTGATCAAGAACTTCCAGACCCCCAGAGAATGCTGGCTCCAT TGCTGCTCGACAGACCCGTGCTTGTTGAGGGGCAGCTGCTGCCGGCAGATTCCCCTCGTGCCTTACTGCAACTCGAAATG TTGGTGGGTAACTGGCTCGTACGAACCGCTGAAATAATCAGTGCCGAAGTTCTCGGAACCTGTGGGGAGTGGCCCGAACT ACGCCGATTCCTACTCAACCAGCACTTGATCTCCACACGAGAACTCGAGCGATTGCGTAATCAACTCAATAGTCAGGCCC GTTGGCAAAACTGGATTCAAAGACCAATCCAGCTCTACGAAAGTAAACGACTCCTCTACAGGTTGCGAGACGGCATTATC GAGCCATTACTGCTCACCGAACCTCGTGATGAAGAACTCAGCCAGCTTGGTTGGTGGCAGCAGCAAGTTGCTCTATTGCT CGAAGCCCGCGATGCTCTGGCACCCTCAATGCAATCCCTGATCAAACGCATCGGTGATCTCATGGTGGTCGTGCTTACGC AGGTATTAGGCCGTGCTATTGGTCTGGTTGGACGAGGAATCGCGCAGGGAATGGGACGCAGCCTGAGAGGTGGCTAA
Upstream 100 bases:
>100_bases GTCGGCCAGCATGTAATAACCACGACTAAAAACATCAAGATCTCAACGGACTGGAGGATTTGCCTAACGCTCGTTACCTT GATGGCATAAGCCTTGTGCC
Downstream 100 bases:
>100_bases TTCCCACACTTTCGAGGCAATCAAGCGCCAAAATGAGCATTAAACATCTCCGTGTACTGCCCATGACCCATCTGCTCAAA GCACTCCTGAGCTTGGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLETLSTLQLELKRLQEHWQPAPV MLILPAQLRFNANELLSLDCPGLLQDPDLATLQAAITTLCGGGRVVRLNAAPDSQDSIPQATMGLGQWLLVSGLQQIDND LRLIEAFLNPPPKNELFRLLMEGRQRELRSARDFLLWIWGPLQVGLRNPVLPNRPSQKARINFDFDASRQISAEAAGTVI CLSERNAVAVWGAIRQRLSDSVEKGLRNSTGSLLAIESLNPERRRDLLLALLNQLDHVLKKLRQPNSTETPLNDSWLTLE SELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGIDQELPDPQRMLAPLLLDRPVLVEGQLLPADSPRALLQLEM LVGNWLVRTAEIISAEVLGTCGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAIGLVGRGIAQGMGRSLRGG
Sequences:
>Translated_558_residues MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLETLSTLQLELKRLQEHWQPAPV MLILPAQLRFNANELLSLDCPGLLQDPDLATLQAAITTLCGGGRVVRLNAAPDSQDSIPQATMGLGQWLLVSGLQQIDND LRLIEAFLNPPPKNELFRLLMEGRQRELRSARDFLLWIWGPLQVGLRNPVLPNRPSQKARINFDFDASRQISAEAAGTVI CLSERNAVAVWGAIRQRLSDSVEKGLRNSTGSLLAIESLNPERRRDLLLALLNQLDHVLKKLRQPNSTETPLNDSWLTLE SELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGIDQELPDPQRMLAPLLLDRPVLVEGQLLPADSPRALLQLEM LVGNWLVRTAEIISAEVLGTCGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAIGLVGRGIAQGMGRSLRGG >Mature_558_residues MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLETLSTLQLELKRLQEHWQPAPV MLILPAQLRFNANELLSLDCPGLLQDPDLATLQAAITTLCGGGRVVRLNAAPDSQDSIPQATMGLGQWLLVSGLQQIDND LRLIEAFLNPPPKNELFRLLMEGRQRELRSARDFLLWIWGPLQVGLRNPVLPNRPSQKARINFDFDASRQISAEAAGTVI CLSERNAVAVWGAIRQRLSDSVEKGLRNSTGSLLAIESLNPERRRDLLLALLNQLDHVLKKLRQPNSTETPLNDSWLTLE SELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGIDQELPDPQRMLAPLLLDRPVLVEGQLLPADSPRALLQLEM LVGNWLVRTAEIISAEVLGTCGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAIGLVGRGIAQGMGRSLRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 - InterPro: IPR016837 - InterPro: IPR022552 [H]
Pfam domain/function: PF12452 DUF3685; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 62364; Mature: 62364
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLET CCCCCCCCCCEEEEEEHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEECHHHHH LSTLQLELKRLQEHWQPAPVMLILPAQLRFNANELLSLDCPGLLQDPDLATLQAAITTLC HHHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHC GGGRVVRLNAAPDSQDSIPQATMGLGQWLLVSGLQQIDNDLRLIEAFLNPPPKNELFRLL CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MEGRQRELRSARDFLLWIWGPLQVGLRNPVLPNRPSQKARINFDFDASRQISAEAAGTVI HHHHHHHHHHHHHEEEEEECHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEE CLSERNAVAVWGAIRQRLSDSVEKGLRNSTGSLLAIESLNPERRRDLLLALLNQLDHVLK EEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH KLRQPNSTETPLNDSWLTLESELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGI HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCC DQELPDPQRMLAPLLLDRPVLVEGQLLPADSPRALLQLEMLVGNWLVRTAEIISAEVLGT HHHCCCHHHHHHHHHHCCCEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC CGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVGRGIAQGMGRSLRGG HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVNLADSTSTQILLLAPDLLGESLALQLSSANPNLDVILRTDQLSRHPVLVILSVESLET CCCCCCCCCCEEEEEEHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEECHHHHH LSTLQLELKRLQEHWQPAPVMLILPAQLRFNANELLSLDCPGLLQDPDLATLQAAITTLC HHHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHC GGGRVVRLNAAPDSQDSIPQATMGLGQWLLVSGLQQIDNDLRLIEAFLNPPPKNELFRLL CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH MEGRQRELRSARDFLLWIWGPLQVGLRNPVLPNRPSQKARINFDFDASRQISAEAAGTVI HHHHHHHHHHHHHEEEEEECHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEE CLSERNAVAVWGAIRQRLSDSVEKGLRNSTGSLLAIESLNPERRRDLLLALLNQLDHVLK EEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH KLRQPNSTETPLNDSWLTLESELREQALRSMAGNYVRLPRGGELKPVADQLLATADLKGI HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCC DQELPDPQRMLAPLLLDRPVLVEGQLLPADSPRALLQLEMLVGNWLVRTAEIISAEVLGT HHHCCCHHHHHHHHHHCCCEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC CGEWPELRRFLLNQHLISTRELERLRNQLNSQARWQNWIQRPIQLYESKRLLYRLRDGII CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EPLLLTEPRDEELSQLGWWQQQVALLLEARDALAPSMQSLIKRIGDLMVVVLTQVLGRAI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVGRGIAQGMGRSLRGG HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]