| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is hisA [H]
Identifier: 33862793
GI number: 33862793
Start: 569319
End: 570086
Strand: Direct
Name: hisA [H]
Synonym: PMT0520
Alternate gene names: 33862793
Gene position: 569319-570086 (Clockwise)
Preceding gene: 33862791
Following gene: 33862794
Centisome position: 23.61
GC content: 55.99
Gene sequence:
>768_bases ATGGAGATCATCCCAGCCATCGACCTACTGGACAGCGTGTGCGTGCGACTTCACCAGGGGGACTACGAGAAGGTGACTCG CTTCAGCGAGGACCCCGTTGATCAAGCCCTTAGCTGGCAGAAGCAGGGGGCAACTCGCCTACACCTGGTGGATCTCGATG GCGCCAAATCTGGTGAGCCGGTCAACGATTCCTGTGTGCGAGCTATTACCTCTGCCCTCAATATTCCTGTCCAGCTCGGG GGTGGTGTGCGCACTCTCGAACGAGCCGAAGAACTCCTCGCCTACGGCCTTGAACAAGTCATCCTTGGCACCGTGGCAAT AGAGCAACCCCAGCTAGTGAAACAGCTTGCCCAAAGGAATCCCGGTCGGATTATCGTCGGCATCGATGCCAAAAACGGCA AGGTGGCAACGCGAGGATGGATTAGCCAAAGCGAGGTGAATGCAACAGACTTAGCCTCCGATTTCAATGCTGCCGGTATC GCCGCAATCATCAGCACAGACATTGCAACTGATGGAACCCTTGAAGGGCCGAACCTAGAGTCACTACGTGCAATGGCAAA CGCCAGCAGCGTTCCAGTAATCGCCTCCGGAGGCGTGGGTTGCATGGCCGATCTACTTAGTCTGCTGGCTCTTGAACCCT ATGGAGTGAGTGGGGTGATTGTGGGAAGAGCTCTCTACGACGGCAAGGTGGATCTAAAAGAAGCAATCCGAGCCATTGGC GATGGCCGACTGCAGGACCCACCAACTAGCAAACCACTGATGGCATGA
Upstream 100 bases:
>100_bases AGCTGAATCATCAAACGCGCATATTGAAGCGCGTTCGATCAGCAACTGAAGGCCCTTCGCCCTGCAGGATGGAGGTCTAA GGCAACGTTCTTTGCCAATC
Downstream 100 bases:
>100_bases GGACCTTGGACTATGAATTGACCTTGCTGGAGCCGTAAATTGAATTCATTATCACTTCAGTTGTGATGCACACCGCTCCC AAGATCAGCGGCTCAAGTGC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MEIIPAIDLLDSVCVRLHQGDYEKVTRFSEDPVDQALSWQKQGATRLHLVDLDGAKSGEPVNDSCVRAITSALNIPVQLG GGVRTLERAEELLAYGLEQVILGTVAIEQPQLVKQLAQRNPGRIIVGIDAKNGKVATRGWISQSEVNATDLASDFNAAGI AAIISTDIATDGTLEGPNLESLRAMANASSVPVIASGGVGCMADLLSLLALEPYGVSGVIVGRALYDGKVDLKEAIRAIG DGRLQDPPTSKPLMA
Sequences:
>Translated_255_residues MEIIPAIDLLDSVCVRLHQGDYEKVTRFSEDPVDQALSWQKQGATRLHLVDLDGAKSGEPVNDSCVRAITSALNIPVQLG GGVRTLERAEELLAYGLEQVILGTVAIEQPQLVKQLAQRNPGRIIVGIDAKNGKVATRGWISQSEVNATDLASDFNAAGI AAIISTDIATDGTLEGPNLESLRAMANASSVPVIASGGVGCMADLLSLLALEPYGVSGVIVGRALYDGKVDLKEAIRAIG DGRLQDPPTSKPLMA >Mature_255_residues MEIIPAIDLLDSVCVRLHQGDYEKVTRFSEDPVDQALSWQKQGATRLHLVDLDGAKSGEPVNDSCVRAITSALNIPVQLG GGVRTLERAEELLAYGLEQVILGTVAIEQPQLVKQLAQRNPGRIIVGIDAKNGKVATRGWISQSEVNATDLASDFNAAGI AAIISTDIATDGTLEGPNLESLRAMANASSVPVIASGGVGCMADLLSLLALEPYGVSGVIVGRALYDGKVDLKEAIRAIG DGRLQDPPTSKPLMA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=241, Percent_Identity=38.5892116182573, Blast_Score=152, Evalue=3e-38, Organism=Escherichia coli, GI1788336, Length=245, Percent_Identity=27.3469387755102, Blast_Score=84, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 26818; Mature: 26818
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIIPAIDLLDSVCVRLHQGDYEKVTRFSEDPVDQALSWQKQGATRLHLVDLDGAKSGEP CCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCC VNDSCVRAITSALNIPVQLGGGVRTLERAEELLAYGLEQVILGTVAIEQPQLVKQLAQRN CCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC PGRIIVGIDAKNGKVATRGWISQSEVNATDLASDFNAAGIAAIISTDIATDGTLEGPNLE CCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHH SLRAMANASSVPVIASGGVGCMADLLSLLALEPYGVSGVIVGRALYDGKVDLKEAIRAIG HHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEEHCCCCCCHHHHHHHHC DGRLQDPPTSKPLMA CCCCCCCCCCCCCCC >Mature Secondary Structure MEIIPAIDLLDSVCVRLHQGDYEKVTRFSEDPVDQALSWQKQGATRLHLVDLDGAKSGEP CCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCC VNDSCVRAITSALNIPVQLGGGVRTLERAEELLAYGLEQVILGTVAIEQPQLVKQLAQRN CCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC PGRIIVGIDAKNGKVATRGWISQSEVNATDLASDFNAAGIAAIISTDIATDGTLEGPNLE CCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHH SLRAMANASSVPVIASGGVGCMADLLSLLALEPYGVSGVIVGRALYDGKVDLKEAIRAIG HHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEEHCCCCCCHHHHHHHHC DGRLQDPPTSKPLMA CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA