| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862770
Identifier: 33862770
GI number: 33862770
Start: 550731
End: 551327
Strand: Direct
Name: 33862770
Synonym: PMT0497
Alternate gene names: NA
Gene position: 550731-551327 (Clockwise)
Preceding gene: 33862769
Following gene: 33862771
Centisome position: 22.84
GC content: 54.27
Gene sequence:
>597_bases ATGAGCTTCCGATTCCTGCCAGATGATCCAGTCCCAACAGTGCGGATGCCAACAGGGCAATCCATCCTTATCGATCCTGC CGCTCGTTCAGGCGGCGCTTGTATCGAAGTCGTTGAGGGTATCGCCCGCGTTTACTGCCCATGCGAAGAAACTGAAGGAA TGACTCTCGCTTTTCTTCAGGAAGGCGATCAACTACGCACCGACCGCTTGTGCAGTGAAGGTGTCTGTGTTGAAGCACTT ACACCATTATGTTTTCGCAGCGATGCTGAAATCCGTGATGGGCATGACTTTGATGCGGTGAACGAATGGACCCTGCAGCT GCTTCGCATTCGCCATTTAGGTAATGCAGAACAGCGTCTCCAGGCATTGCTCGCCCTGCTTGTTAACCGCTTAGGGCGAC GCTGTGGCGACTGGTGTGATCTCCCCTTCCGACTCACCCATGAGCGAATTGGTGAACTCATCGGATCTACGCGGGTGACC TCCACGCGACTGATCTCCAGGCTAAGGACCGCTGATCTTTTAAACGTTCCCAGCGGAGAACCCATCTTGCGCTTGGCCCC AGCCTTAATTGAATCAGCACCTCTTGCCGCCTCATAG
Upstream 100 bases:
>100_bases TCCTCGCAACAGCACTATTGCTATTGAGAATCGCTTGCAAAAGGCACCGTTAAGCGTATAGGTTGCGAAGAGTTCTCAAA AAGCACTTGAGAGGCTTCGC
Downstream 100 bases:
>100_bases CTCTGAGTGAATGAAAGACCTAGTTACGACATCAGACAGCGTTATCGCCAGTCTCTGTAGAGAGGTTGATGGGATCCGTC ATCGCTGTAGCTCATTGCTA
Product: Crp family regulatory proteins
Products: NA
Alternate protein names: Crp Family Regulatory Protein; Regulatory Proteins Crp Family Protein; Crp Family Regulatory Proteins; Bacterial Regulatory Protein Crp Family
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSFRFLPDDPVPTVRMPTGQSILIDPAARSGGACIEVVEGIARVYCPCEETEGMTLAFLQEGDQLRTDRLCSEGVCVEAL TPLCFRSDAEIRDGHDFDAVNEWTLQLLRIRHLGNAEQRLQALLALLVNRLGRRCGDWCDLPFRLTHERIGELIGSTRVT STRLISRLRTADLLNVPSGEPILRLAPALIESAPLAAS
Sequences:
>Translated_198_residues MSFRFLPDDPVPTVRMPTGQSILIDPAARSGGACIEVVEGIARVYCPCEETEGMTLAFLQEGDQLRTDRLCSEGVCVEAL TPLCFRSDAEIRDGHDFDAVNEWTLQLLRIRHLGNAEQRLQALLALLVNRLGRRCGDWCDLPFRLTHERIGELIGSTRVT STRLISRLRTADLLNVPSGEPILRLAPALIESAPLAAS >Mature_197_residues SFRFLPDDPVPTVRMPTGQSILIDPAARSGGACIEVVEGIARVYCPCEETEGMTLAFLQEGDQLRTDRLCSEGVCVEALT PLCFRSDAEIRDGHDFDAVNEWTLQLLRIRHLGNAEQRLQALLALLVNRLGRRCGDWCDLPFRLTHERIGELIGSTRVTS TRLISRLRTADLLNVPSGEPILRLAPALIESAPLAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21850; Mature: 21719
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFRFLPDDPVPTVRMPTGQSILIDPAARSGGACIEVVEGIARVYCPCEETEGMTLAFLQ CCCCCCCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEC EGDQLRTDRLCSEGVCVEALTPLCFRSDAEIRDGHDFDAVNEWTLQLLRIRHLGNAEQRL CCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH QALLALLVNRLGRRCGDWCDLPFRLTHERIGELIGSTRVTSTRLISRLRTADLLNVPSGE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC PILRLAPALIESAPLAAS HHHHHHHHHHHCCCCCCC >Mature Secondary Structure SFRFLPDDPVPTVRMPTGQSILIDPAARSGGACIEVVEGIARVYCPCEETEGMTLAFLQ CCCCCCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEC EGDQLRTDRLCSEGVCVEALTPLCFRSDAEIRDGHDFDAVNEWTLQLLRIRHLGNAEQRL CCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH QALLALLVNRLGRRCGDWCDLPFRLTHERIGELIGSTRVTSTRLISRLRTADLLNVPSGE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC PILRLAPALIESAPLAAS HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA