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The map label for this gene is 33862761

Identifier: 33862761

GI number: 33862761

Start: 539687

End: 539884

Strand: Direct

Name: 33862761

Synonym: PMT0488

Alternate gene names: NA

Gene position: 539687-539884 (Clockwise)

Preceding gene: 33862760

Following gene: 33862763

Centisome position: 22.39

GC content: 53.54

Gene sequence:

>198_bases
TTGATCCGAGAGGCTGAGGCCCTTTGGCATGTGGATGTGAGGGAACTCAGACGATTGGGTGCCTTGGAGTTGTCCCAGTT
GCTTGAGGAGGTTCCACCTGGCCAGCGGGGACGGGTTAATCGTTGGTTGCATCGCTATTCAGTTGCAACCAGGTTCCAAT
CAACTGGTTTGGATCCCAATTGCTCTGAACGGTCATGA

Upstream 100 bases:

>100_bases
CCATCAACGCTCTAGGCAGTGGACTTTCAGTCGTTCACTTCTAGTTGACCCACTACGATCTCGGCTGCGTCAGTGGCAAC
AGGTACGAACTTGGGCGCGT

Downstream 100 bases:

>100_bases
ATCGTTGATGTCACATCAGAAAAAATTCTTTCTGGCAACCATCTTTATTTTTTATTGTGCAATAGTAGCTGATTAAATGT
TCAACCAATAAAACATTTTA

Product: integrase zinc binding subunit

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MIREAEALWHVDVRELRRLGALELSQLLEEVPPGQRGRVNRWLHRYSVATRFQSTGLDPNCSERS

Sequences:

>Translated_65_residues
MIREAEALWHVDVRELRRLGALELSQLLEEVPPGQRGRVNRWLHRYSVATRFQSTGLDPNCSERS
>Mature_65_residues
MIREAEALWHVDVRELRRLGALELSQLLEEVPPGQRGRVNRWLHRYSVATRFQSTGLDPNCSERS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7587; Mature: 7587

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIREAEALWHVDVRELRRLGALELSQLLEEVPPGQRGRVNRWLHRYSVATRFQSTGLDPN
CCCCCHHHHHCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
CSERS
CCCCC
>Mature Secondary Structure
MIREAEALWHVDVRELRRLGALELSQLLEEVPPGQRGRVNRWLHRYSVATRFQSTGLDPN
CCCCCHHHHHCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
CSERS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA