Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33862750

Identifier: 33862750

GI number: 33862750

Start: 528714

End: 529028

Strand: Direct

Name: 33862750

Synonym: PMT0477

Alternate gene names: NA

Gene position: 528714-529028 (Clockwise)

Preceding gene: 33862749

Following gene: 33862751

Centisome position: 21.93

GC content: 47.94

Gene sequence:

>315_bases
TTGAGTAGCTTCTGGCAGCGAAGTCGTGACAATTTGGTTGCCTCGATCGTTGCCTATGCCAGCTGGCTCGTCGTCGATTG
GCTCGGGCATGTTTCTTCGCTGGTTGTCCAGTCCAATGATGCTCCCTCCAATGTTGGAACAATCTTGTTTACAGACCTTT
TAATGCCAATCCTGGTGGTGATCTTGTTGTGGCTAAGTCGCGAAGAACAAACCCGACTAAAACCTAAGCCCAAAAAACAC
TTTCGATTCGTTGTTGCAAGCTGCGCTCCCTTCAAGAACACTGCTGAAATCCCGTTGCTAATCCTAGGAAAATGA

Upstream 100 bases:

>100_bases
ATATATCTCTTGGCCAGTTCATCGCCGAGCAGATCGGCTGGCCTAATCGCCCATTCCAGAATGAAGTGGCATTCGCCATC
TCACCATTGGCATCCTTGGG

Downstream 100 bases:

>100_bases
GGATGTGGCAGAGCTTTCATAAGCTCTCAGTCTGCTGACGATGCAGCTTAAAATCATAACGAAAAAAAACCTTCTAAAAC
TCTTTTTACAGAAAATCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSSFWQRSRDNLVASIVAYASWLVVDWLGHVSSLVVQSNDAPSNVGTILFTDLLMPILVVILLWLSREEQTRLKPKPKKH
FRFVVASCAPFKNTAEIPLLILGK

Sequences:

>Translated_104_residues
MSSFWQRSRDNLVASIVAYASWLVVDWLGHVSSLVVQSNDAPSNVGTILFTDLLMPILVVILLWLSREEQTRLKPKPKKH
FRFVVASCAPFKNTAEIPLLILGK
>Mature_103_residues
SSFWQRSRDNLVASIVAYASWLVVDWLGHVSSLVVQSNDAPSNVGTILFTDLLMPILVVILLWLSREEQTRLKPKPKKHF
RFVVASCAPFKNTAEIPLLILGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11720; Mature: 11589

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFWQRSRDNLVASIVAYASWLVVDWLGHVSSLVVQSNDAPSNVGTILFTDLLMPILVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ILLWLSREEQTRLKPKPKKHFRFVVASCAPFKNTAEIPLLILGK
HHHHHCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
SSFWQRSRDNLVASIVAYASWLVVDWLGHVSSLVVQSNDAPSNVGTILFTDLLMPILVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ILLWLSREEQTRLKPKPKKHFRFVVASCAPFKNTAEIPLLILGK
HHHHHCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA