| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862733
Identifier: 33862733
GI number: 33862733
Start: 514712
End: 515242
Strand: Direct
Name: 33862733
Synonym: PMT0460
Alternate gene names: NA
Gene position: 514712-515242 (Clockwise)
Preceding gene: 33862732
Following gene: 33862735
Centisome position: 21.35
GC content: 50.09
Gene sequence:
>531_bases ATGCCTTCATTCCTCAATCTAGTGGATTGGGGAGAAAGAGTAATTGTCAAGGTTCTCACAATGATCACCGTTGTTGTGAT CATTGCGGCATTGATACAGCTCATCGTGAATGTTGGCAATGAATTGTTCGTTGATTCACAGCAGAGCTGGCTTGGGGATG ACTTAATCAAGGTTCTTGGTGATCTGTTAACTGTGCTGATTGCTCTTGAAGTGCTTCAGAACGTCACCAGTTATCTCCGC CGCCACGTGGTACAGATTGAGCTGGTGCTTGTTACAGCGCTGACTGCCGTGGCGCGCAAAGTGATCGTGTTGCCACCAGG ATCTGATGATAAACCTCAGTTACTGGCTGGACTGGGGATTGCCTCGATTGCTTTGGCCGGGGCTTATTGGCTGGTTAAGA GAGCGACAATTGATCCGGCCCTTTCTGCTCGTTCCAGAACAAAGCCAACCAAATTGTCCCAGGGTGAGGATCAGTTCGTT CCACACGATGCAGACGGTGAGGGGCCAAATGCAGCTGATCTCCCACGCTGA
Upstream 100 bases:
>100_bases GCGATACCAAACTTGAGAATCCCAGCGGCGATACCCCGGCTCAGCCTTCCTACAATCCGTTCAATAACTGAGATCCGCCT TGCGCCGTCTCAAGCGGGCA
Downstream 100 bases:
>100_bases GATCAACACACACATCGGGATCTTTCAGTTGCATACGTGCACTTCCCTTCATTAGCACAATCCATTCGTGATCAGCCTGG TCATACCAGAACCCCTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MPSFLNLVDWGERVIVKVLTMITVVVIIAALIQLIVNVGNELFVDSQQSWLGDDLIKVLGDLLTVLIALEVLQNVTSYLR RHVVQIELVLVTALTAVARKVIVLPPGSDDKPQLLAGLGIASIALAGAYWLVKRATIDPALSARSRTKPTKLSQGEDQFV PHDADGEGPNAADLPR
Sequences:
>Translated_176_residues MPSFLNLVDWGERVIVKVLTMITVVVIIAALIQLIVNVGNELFVDSQQSWLGDDLIKVLGDLLTVLIALEVLQNVTSYLR RHVVQIELVLVTALTAVARKVIVLPPGSDDKPQLLAGLGIASIALAGAYWLVKRATIDPALSARSRTKPTKLSQGEDQFV PHDADGEGPNAADLPR >Mature_175_residues PSFLNLVDWGERVIVKVLTMITVVVIIAALIQLIVNVGNELFVDSQQSWLGDDLIKVLGDLLTVLIALEVLQNVTSYLRR HVVQIELVLVTALTAVARKVIVLPPGSDDKPQLLAGLGIASIALAGAYWLVKRATIDPALSARSRTKPTKLSQGEDQFVP HDADGEGPNAADLPR
Specific function: Unknown
COG id: COG3431
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18990; Mature: 18858
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFLNLVDWGERVIVKVLTMITVVVIIAALIQLIVNVGNELFVDSQQSWLGDDLIKVLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCHHHHHHHHHHHHHH DLLTVLIALEVLQNVTSYLRRHVVQIELVLVTALTAVARKVIVLPPGSDDKPQLLAGLGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHH ASIALAGAYWLVKRATIDPALSARSRTKPTKLSQGEDQFVPHDADGEGPNAADLPR HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PSFLNLVDWGERVIVKVLTMITVVVIIAALIQLIVNVGNELFVDSQQSWLGDDLIKVLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCHHHHHHHHHHHHHH DLLTVLIALEVLQNVTSYLRRHVVQIELVLVTALTAVARKVIVLPPGSDDKPQLLAGLGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHH ASIALAGAYWLVKRATIDPALSARSRTKPTKLSQGEDQFVPHDADGEGPNAADLPR HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA