| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862702
Identifier: 33862702
GI number: 33862702
Start: 482480
End: 483970
Strand: Direct
Name: 33862702
Synonym: PMT0429
Alternate gene names: NA
Gene position: 482480-483970 (Clockwise)
Preceding gene: 33862701
Following gene: 33862703
Centisome position: 20.01
GC content: 53.12
Gene sequence:
>1491_bases ATGGCTGAAGAGATACCGCACTCTCTGAACCCCCTAGCGTTATCACAAAGCTGGGGCCAAGACGAGCATGACGATATCCA CACGGCACCACTGATTGCACTTGAGGAGGTGCTTGAAACAAGCAGCTTGCGTCGCGGCATAAGCCGAGAACAATTGCTAA GTGAGTTGTTGCGTGATCTCGATCATCGCCGTTTAATCCCACTGATAGGAATGCTGCCGAGAGGCTGGAGGATGGCCCCG GCCGTTCTTCCTGAACTTCTACGAGGGATTGCAACCCTATTAGAAGATGGTTTGCTAAGCCCTCTGCTGTTGGCAGCGTT GGCTGATGACCTACAGCATCTGCTGCCGATTCGGGAGAACGAACCGCCCAGTGCCCTGGAACTCTGGCGCCAACCCTCAG TTGCCTTAAAGCCAGGACATGGTGTGGGGGTGCCGTGCAATTTAAAGAACTGTCGATTACTGGCCAACCAGCCAATCACT AGTGATGCATTTTCTGACCCGAAACAGCTTGCTCCAACCGCTTTAGGGAAAGGCCTCACGGCACTCGGTAGTGGCCTGGT CTGGCACAACGAGGGGTTGGTCATGCTTCAGAACGAGTCTTCTCAACGCATGAATGAGCTCATGGCTCAGGTGCTCAATT GCCTCGCTGCCAATCGTCTACCAGAGGCATTGCATCCCTCGGAACCTTTCTTATTCGAGGGGCTATCCTCAGGACGTCAA CTGATTGAGTTGCTGAACCGACAGGGTTGGCACTGTTGCGGACGAATTAGAGCCAGTGTGGCCAGCTTCGGCCTGGGAGC TAGCCAAGCCAATGAAAGCGGGAGATGGTTTCAGGTCCCTTTGGCGATTCCATATCGCACGGGTCTAGAGGATGATCGCA ACCAGGAGATTCTCAGCTTGTTGCCGCATTGCAGCTTCGAGCTTGAACTGCAACCACAGGGCAATGATTCCATTTTACTG CAGTATTGCCAGGATATAGAAGGCGTGAATGGCTGGACTGCGATGAACGACCTGCATCGTCCCTGGCAGAACGATCGCCA CAATGGAACAGTCGCGTACCCCAGTCAGCCATTGACACAGCAACGCCTCGCCGATGCAATAGAGATCACCGAATTAATCG CAGCGGTGCACAATATGGAGGCAAGCTCGCAAAAGCTACATCTAGGGGGGTATGGAGCCCTGGGCTATTGCATTGATTCA ACAGCACTACTGGAGCAATGCCTTAACGGCTCTACCCATTTATTTCCACTGACACTCGGAGGAATATGGCGAGAACGACT ACGCCGTAGCCTCGACATCCTTCTTGATCAGGGTTTTTGTATCAACACTAGTGTGGTAGATCGCTACCGATGGGGCCTTG ACACGTTGCACCAGGATCTGAGCCTGCAAGGCTCTGCACGATTAGAGGCAATGCAGAGGCTTTTAAGCTGTCAACCCAGC CACAGTCCATTTGCTCTTGTGAGGAACCTCAACGGCGAAGTGGATCTCTAA
Upstream 100 bases:
>100_bases CCAGCAGACGTCTATGAGCAATTCCGTGGACGACCAGCGACCACTGAGGCATTGATTCGCCATTCCGGCTTAGCCGCAAG CGCTGCGGATCAGTGAGGAG
Downstream 100 bases:
>100_bases AGCGATGCCAATGCACGTTTTCAGTTATAGATAGATCAACCGGAAGCCGAGCGAGTCAATGCCAAGCAGATGATCTACTG CCACATCAGTGAAGTTAACA
Product: arginine repressor domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MAEEIPHSLNPLALSQSWGQDEHDDIHTAPLIALEEVLETSSLRRGISREQLLSELLRDLDHRRLIPLIGMLPRGWRMAP AVLPELLRGIATLLEDGLLSPLLLAALADDLQHLLPIRENEPPSALELWRQPSVALKPGHGVGVPCNLKNCRLLANQPIT SDAFSDPKQLAPTALGKGLTALGSGLVWHNEGLVMLQNESSQRMNELMAQVLNCLAANRLPEALHPSEPFLFEGLSSGRQ LIELLNRQGWHCCGRIRASVASFGLGASQANESGRWFQVPLAIPYRTGLEDDRNQEILSLLPHCSFELELQPQGNDSILL QYCQDIEGVNGWTAMNDLHRPWQNDRHNGTVAYPSQPLTQQRLADAIEITELIAAVHNMEASSQKLHLGGYGALGYCIDS TALLEQCLNGSTHLFPLTLGGIWRERLRRSLDILLDQGFCINTSVVDRYRWGLDTLHQDLSLQGSARLEAMQRLLSCQPS HSPFALVRNLNGEVDL
Sequences:
>Translated_496_residues MAEEIPHSLNPLALSQSWGQDEHDDIHTAPLIALEEVLETSSLRRGISREQLLSELLRDLDHRRLIPLIGMLPRGWRMAP AVLPELLRGIATLLEDGLLSPLLLAALADDLQHLLPIRENEPPSALELWRQPSVALKPGHGVGVPCNLKNCRLLANQPIT SDAFSDPKQLAPTALGKGLTALGSGLVWHNEGLVMLQNESSQRMNELMAQVLNCLAANRLPEALHPSEPFLFEGLSSGRQ LIELLNRQGWHCCGRIRASVASFGLGASQANESGRWFQVPLAIPYRTGLEDDRNQEILSLLPHCSFELELQPQGNDSILL QYCQDIEGVNGWTAMNDLHRPWQNDRHNGTVAYPSQPLTQQRLADAIEITELIAAVHNMEASSQKLHLGGYGALGYCIDS TALLEQCLNGSTHLFPLTLGGIWRERLRRSLDILLDQGFCINTSVVDRYRWGLDTLHQDLSLQGSARLEAMQRLLSCQPS HSPFALVRNLNGEVDL >Mature_495_residues AEEIPHSLNPLALSQSWGQDEHDDIHTAPLIALEEVLETSSLRRGISREQLLSELLRDLDHRRLIPLIGMLPRGWRMAPA VLPELLRGIATLLEDGLLSPLLLAALADDLQHLLPIRENEPPSALELWRQPSVALKPGHGVGVPCNLKNCRLLANQPITS DAFSDPKQLAPTALGKGLTALGSGLVWHNEGLVMLQNESSQRMNELMAQVLNCLAANRLPEALHPSEPFLFEGLSSGRQL IELLNRQGWHCCGRIRASVASFGLGASQANESGRWFQVPLAIPYRTGLEDDRNQEILSLLPHCSFELELQPQGNDSILLQ YCQDIEGVNGWTAMNDLHRPWQNDRHNGTVAYPSQPLTQQRLADAIEITELIAAVHNMEASSQKLHLGGYGALGYCIDST ALLEQCLNGSTHLFPLTLGGIWRERLRRSLDILLDQGFCINTSVVDRYRWGLDTLHQDLSLQGSARLEAMQRLLSCQPSH SPFALVRNLNGEVDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54928; Mature: 54797
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEIPHSLNPLALSQSWGQDEHDDIHTAPLIALEEVLETSSLRRGISREQLLSELLRDL CCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DHRRLIPLIGMLPRGWRMAPAVLPELLRGIATLLEDGLLSPLLLAALADDLQHLLPIREN HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC EPPSALELWRQPSVALKPGHGVGVPCNLKNCRLLANQPITSDAFSDPKQLAPTALGKGLT CCCHHHHHHCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCHH ALGSGLVWHNEGLVMLQNESSQRMNELMAQVLNCLAANRLPEALHPSEPFLFEGLSSGRQ HHHCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHH LIELLNRQGWHCCGRIRASVASFGLGASQANESGRWFQVPLAIPYRTGLEDDRNQEILSL HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHH LPHCSFELELQPQGNDSILLQYCQDIEGVNGWTAMNDLHRPWQNDRHNGTVAYPSQPLTQ HCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCHH QRLADAIEITELIAAVHNMEASSQKLHLGGYGALGYCIDSTALLEQCLNGSTHLFPLTLG HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHCHHHHHHHHHCCCCEEEEEHHH GIWRERLRRSLDILLDQGFCINTSVVDRYRWGLDTLHQDLSLQGSARLEAMQRLLSCQPS HHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC HSPFALVRNLNGEVDL CCHHHHHHCCCCCCCC >Mature Secondary Structure AEEIPHSLNPLALSQSWGQDEHDDIHTAPLIALEEVLETSSLRRGISREQLLSELLRDL CCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DHRRLIPLIGMLPRGWRMAPAVLPELLRGIATLLEDGLLSPLLLAALADDLQHLLPIREN HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC EPPSALELWRQPSVALKPGHGVGVPCNLKNCRLLANQPITSDAFSDPKQLAPTALGKGLT CCCHHHHHHCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCHH ALGSGLVWHNEGLVMLQNESSQRMNELMAQVLNCLAANRLPEALHPSEPFLFEGLSSGRQ HHHCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHH LIELLNRQGWHCCGRIRASVASFGLGASQANESGRWFQVPLAIPYRTGLEDDRNQEILSL HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHH LPHCSFELELQPQGNDSILLQYCQDIEGVNGWTAMNDLHRPWQNDRHNGTVAYPSQPLTQ HCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCHH QRLADAIEITELIAAVHNMEASSQKLHLGGYGALGYCIDSTALLEQCLNGSTHLFPLTLG HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHCHHHHHHHHHCCCCEEEEEHHH GIWRERLRRSLDILLDQGFCINTSVVDRYRWGLDTLHQDLSLQGSARLEAMQRLLSCQPS HHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC HSPFALVRNLNGEVDL CCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA