| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yaeT [H]
Identifier: 308535195
GI number: 308535195
Start: 992180
End: 994639
Strand: Direct
Name: yaeT [H]
Synonym: NA
Alternate gene names: 308535195
Gene position: 992180-994639 (Clockwise)
Preceding gene: 197117230
Following gene: 197117232
Centisome position: 21.5
GC content: 61.67
Gene sequence:
>2460_bases TTGCTGCGTACATTGCGTACATCGATTTCAGCCATGCTTGCCGTTCAGCTCCTGGTCTGCCCGACGCTGTCGTTTGCCCA AGGCGAACACCACGGCCCGTCCGCCGCGACGGCCCCGTCAGCCCAGCCCGCTCAGCCTGCCGCCCCGCCGGCGCAACCGG CCCCGGCCCCTGCGCAACCGTCACCGGCACCCGCGCAACCGGCGGCAGCTCCCCAGTCCGGCACCGAGAAAATCGCCGCG GTCAAGATCAGCGGCAACCGGCGCATCGAGACCGCCGCCATCATGCCGGCGCTGCGGACCAAGGCCGGCGAGGTGCTGGA CCCGGCGAAGGTCGATGCGGACCTGAAGGCGATCTACCAGCTGGGGTACTTCAAGGACGTGAAGGTGCAGACCGAAGCCG CGGACGGGGGTGTGGTCCTCGAGTACGTCGTGCAGGAAAAGCCGATCGTGCGCGAGGTGAAGGTCGAGGGGGCGAAAGAA CTGAGCACCGAGAAGGTGCGCGAGGCGGTGGAGATCAAACCCAACGCCATCTTCTCCCAGAAGGACCTGCAAAAAAGCGT CAAGAAGGTGAAAAAGCTCTACGCGGACGAGGGCTACTACCTGGCCGAGGTGACCGGGGACATCAGCATGCGCTCGGACA CCGAGCTGAACGTCATCTTCCGCGTCAAGGAAGGGGACAAGGTCCTCATCAAAGAGATCCGCTTCGAGGGGAACCAGGCG TTCAGGGCGAAAAAGCTGAAAAAGGCGATGGAGACCTCGGAGAAGTGGATGTTCTCCTGGCTCACCGGCGCCGGCACCTA CAAGGAAGAAACGCTCAAAAACGACATGGCGCTTCTCACCGACCTGTACATGAACGACGGCTACATCAACGTGAAGATCG GCGAGCCGAAGGTGGAGCTTACCCCGGACCGGAAGGCGCTCCAGGTAACCATCGGGATCACGGAAGGGGAGCAGTACCGC ATCGGGAAACTCGACTTCAAGGGAGACCTGCTGGAGCACCGGGACGTGCTCTTCGGCAAGCTGAAGGAAAAGAGCGGGGA AGTCTTCAACCGCAGCAGCTTGCGGGCCGACATCTTCACCCTTACCGACTTCTATGCGGACAAGGGATACGCCTTCGCCA ACGTCTCCCCGATCACCAACCTGAACCGCGAGCAGCGCATCATCGACATCAGCTTCGACCTTGAGAAGGGGGAGAAGGTG AGCATCGACCGGATCAACATCGCCGGCAACACCAAGTCCCGCGACAAGGTGGTGCGGCGCGAGCTGAGGCTGGCAGAGGG GGAGCTTTACAGCTCCACTGCGCTCAAGCGCAGCAAGCAGAACCTGATGAACACCGGCTTCTTCGAGGAGGCCAACCTGG TGACGGCAAAGGGGAGCGCTTCCAACAAGCTCGACTTGAACGTCGAGGTGAAAGAGAAGCCGACCGGCACCTTCAGCATC GGGGCGGGCTACAGCTCGCTGGACGGCATCATAGGGCAAGGGTCGGTGCAGCAGGCCAACTTCCTCGGCCTCGGGCTCAA GATGACCGCGGCCGCCTCATTCGGCAGCAAGTCCCAGACCTACAACCTCGGGCTCACCGATCCGTACTTCATGGATAGCA AGTGGACCATCGGGGGCGATATCTACCGCAACGAGCGGAAGTACCTCGACTACACCCGCCGCGCGACCGGCGGCGACGTC AAGGCGGGATATCCCCTCTCGGATACCTTGAGCACCTTCTGGCTCTACAAGTACGAGCAGAAGGAGATCTTCGACGAGTC GCCCGAGCTGCAGGTCAACATCAACAAGGGGACGATCCTGGCCCCGGACAAGACCTCGACCACCAGTGCCATCGTCGCCA GCATCACCAGCAACACCACCGACTACCGGCTCGACCCCTCCACCGGGATGATGAACACGCTATCCCTGGAGGTCGCCGGT TTTGGCGGCACCAACCGCTACCTCAAGACCATCACCGAGCATACGCTGTTCCATCCCCTGCTCTTCGGGGTGGGGTCGGT GCGGGGAACGCTCGGGTACGTGCAGGGATTTGGCGGCAAAGAAATACCGATCGACGAGAGGTTTTATCTTGGGGGCATCA GCTCGCTGCGCGGCTACTCCTCGCGTACCGTAAGCCCGTTCAAGGCCTCCGACGTCCCGATCATCGATGGTTCAGGTTAT GGCGGGACCAGCCTGAACCGCGTCTATCTGGGGGGCGAGATGGAGGCGGTGGCGAACGTCGAGTACACCTTCCCGCTGTT GAAAGAGGCGGGGCTTAAAGCCGTCCTCTTCTTCGACGCCGGCAACTCGGCCAACAGCCTGAACGACACCTTCGGCAACA TCCTGACCAGCTACGGCGCCGGCATCAGGTGGTTCTCCCCGATAGGGCCGCTGAGACTCGAGTACGGCATCCCGATCAAC CCCAGACAAGGAATTGACTCAGGCGGAAAGCTTGAGTTCTCCATAGGGAGTATTTTCTAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: outer membrane protein assembly complex protein YaeT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 819; Mature: 819
Protein sequence:
NA
Sequences:
>Translated_819_residues MLRTLRTSISAMLAVQLLVCPTLSFAQGEHHGPSAATAPSAQPAQPAAPPAQPAPAPAQPSPAPAQPAAAPQSGTEKIAA VKISGNRRIETAAIMPALRTKAGEVLDPAKVDADLKAIYQLGYFKDVKVQTEAADGGVVLEYVVQEKPIVREVKVEGAKE LSTEKVREAVEIKPNAIFSQKDLQKSVKKVKKLYADEGYYLAEVTGDISMRSDTELNVIFRVKEGDKVLIKEIRFEGNQA FRAKKLKKAMETSEKWMFSWLTGAGTYKEETLKNDMALLTDLYMNDGYINVKIGEPKVELTPDRKALQVTIGITEGEQYR IGKLDFKGDLLEHRDVLFGKLKEKSGEVFNRSSLRADIFTLTDFYADKGYAFANVSPITNLNREQRIIDISFDLEKGEKV SIDRINIAGNTKSRDKVVRRELRLAEGELYSSTALKRSKQNLMNTGFFEEANLVTAKGSASNKLDLNVEVKEKPTGTFSI GAGYSSLDGIIGQGSVQQANFLGLGLKMTAAASFGSKSQTYNLGLTDPYFMDSKWTIGGDIYRNERKYLDYTRRATGGDV KAGYPLSDTLSTFWLYKYEQKEIFDESPELQVNINKGTILAPDKTSTTSAIVASITSNTTDYRLDPSTGMMNTLSLEVAG FGGTNRYLKTITEHTLFHPLLFGVGSVRGTLGYVQGFGGKEIPIDERFYLGGISSLRGYSSRTVSPFKASDVPIIDGSGY GGTSLNRVYLGGEMEAVANVEYTFPLLKEAGLKAVLFFDAGNSANSLNDTFGNILTSYGAGIRWFSPIGPLRLEYGIPIN PRQGIDSGGKLEFSIGSIF >Mature_819_residues MLRTLRTSISAMLAVQLLVCPTLSFAQGEHHGPSAATAPSAQPAQPAAPPAQPAPAPAQPSPAPAQPAAAPQSGTEKIAA VKISGNRRIETAAIMPALRTKAGEVLDPAKVDADLKAIYQLGYFKDVKVQTEAADGGVVLEYVVQEKPIVREVKVEGAKE LSTEKVREAVEIKPNAIFSQKDLQKSVKKVKKLYADEGYYLAEVTGDISMRSDTELNVIFRVKEGDKVLIKEIRFEGNQA FRAKKLKKAMETSEKWMFSWLTGAGTYKEETLKNDMALLTDLYMNDGYINVKIGEPKVELTPDRKALQVTIGITEGEQYR IGKLDFKGDLLEHRDVLFGKLKEKSGEVFNRSSLRADIFTLTDFYADKGYAFANVSPITNLNREQRIIDISFDLEKGEKV SIDRINIAGNTKSRDKVVRRELRLAEGELYSSTALKRSKQNLMNTGFFEEANLVTAKGSASNKLDLNVEVKEKPTGTFSI GAGYSSLDGIIGQGSVQQANFLGLGLKMTAAASFGSKSQTYNLGLTDPYFMDSKWTIGGDIYRNERKYLDYTRRATGGDV KAGYPLSDTLSTFWLYKYEQKEIFDESPELQVNINKGTILAPDKTSTTSAIVASITSNTTDYRLDPSTGMMNTLSLEVAG FGGTNRYLKTITEHTLFHPLLFGVGSVRGTLGYVQGFGGKEIPIDERFYLGGISSLRGYSSRTVSPFKASDVPIIDGSGY GGTSLNRVYLGGEMEAVANVEYTFPLLKEAGLKAVLFFDAGNSANSLNDTFGNILTSYGAGIRWFSPIGPLRLEYGIPIN PRQGIDSGGKLEFSIGSIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family [H]
Homologues:
Organism=Homo sapiens, GI225543166, Length=456, Percent_Identity=23.9035087719298, Blast_Score=77, Evalue=5e-14, Organism=Escherichia coli, GI1786374, Length=800, Percent_Identity=26.25, Blast_Score=253, Evalue=4e-68, Organism=Escherichia coli, GI1790666, Length=541, Percent_Identity=22.550831792976, Blast_Score=86, Evalue=1e-17,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 [H]
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]
EC number: NA
Molecular weight: Translated: 89456; Mature: 89456
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRTLRTSISAMLAVQLLVCPTLSFAQGEHHGPSAATAPSAQPAQPAAPPAQPAPAPAQP CCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPAPAQPAAAPQSGTEKIAAVKISGNRRIETAAIMPALRTKAGEVLDPAKVDADLKAIYQ CCCCCCCCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCHHCCHHHHHHHH LGYFKDVKVQTEAADGGVVLEYVVQEKPIVREVKVEGAKELSTEKVREAVEIKPNAIFSQ HCCEEEEEEEEECCCCCEEEEEECCCCCCHHHEECCCHHHHHHHHHHHHHHCCCCCEECH KDLQKSVKKVKKLYADEGYYLAEVTGDISMRSDTELNVIFRVKEGDKVLIKEIRFEGNQA HHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCEEEEEEEECCCCEEEEEEHHCCCCHH FRAKKLKKAMETSEKWMFSWLTGAGTYKEETLKNDMALLTDLYMNDGYINVKIGEPKVEL HHHHHHHHHHHHHHHHEEHHHCCCCCCHHHHHHHHHHHHHHHEECCCEEEEEECCCEEEE TPDRKALQVTIGITEGEQYRIGKLDFKGDLLEHRDVLFGKLKEKSGEVFNRSSLRADIFT CCCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE LTDFYADKGYAFANVSPITNLNREQRIIDISFDLEKGEKVSIDRINIAGNTKSRDKVVRR HHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHH ELRLAEGELYSSTALKRSKQNLMNTGFFEEANLVTAKGSASNKLDLNVEVKEKPTGTFSI HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCEEEE GAGYSSLDGIIGQGSVQQANFLGLGLKMTAAASFGSKSQTYNLGLTDPYFMDSKWTIGGD CCCCHHHCCCCCCCCCCCCCEEECCEEEEEHHCCCCCCCEEECCCCCCEEECCCEEECCC IYRNERKYLDYTRRATGGDVKAGYPLSDTLSTFWLYKYEQKEIFDESPELQVNINKGTIL EECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEEECHHHHCCCCCCEEEEECCCEEE APDKTSTTSAIVASITSNTTDYRLDPSTGMMNTLSLEVAGFGGTNRYLKTITEHTLFHPL CCCCCCCHHHEEEEEECCCCCEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHH LFGVGSVRGTLGYVQGFGGKEIPIDERFYLGGISSLRGYSSRTVSPFKASDVPIIDGSGY HHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCEECCCCC GGTSLNRVYLGGEMEAVANVEYTFPLLKEAGLKAVLFFDAGNSANSLNDTFGNILTSYGA CCCCCCEEEECCCEEEEECEEEEHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCC GIRWFSPIGPLRLEYGIPINPRQGIDSGGKLEFSIGSIF CEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure MLRTLRTSISAMLAVQLLVCPTLSFAQGEHHGPSAATAPSAQPAQPAAPPAQPAPAPAQP CCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPAPAQPAAAPQSGTEKIAAVKISGNRRIETAAIMPALRTKAGEVLDPAKVDADLKAIYQ CCCCCCCCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCHHCCHHHHHHHH LGYFKDVKVQTEAADGGVVLEYVVQEKPIVREVKVEGAKELSTEKVREAVEIKPNAIFSQ HCCEEEEEEEEECCCCCEEEEEECCCCCCHHHEECCCHHHHHHHHHHHHHHCCCCCEECH KDLQKSVKKVKKLYADEGYYLAEVTGDISMRSDTELNVIFRVKEGDKVLIKEIRFEGNQA HHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCEEEEEEEECCCCEEEEEEHHCCCCHH FRAKKLKKAMETSEKWMFSWLTGAGTYKEETLKNDMALLTDLYMNDGYINVKIGEPKVEL HHHHHHHHHHHHHHHHEEHHHCCCCCCHHHHHHHHHHHHHHHEECCCEEEEEECCCEEEE TPDRKALQVTIGITEGEQYRIGKLDFKGDLLEHRDVLFGKLKEKSGEVFNRSSLRADIFT CCCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE LTDFYADKGYAFANVSPITNLNREQRIIDISFDLEKGEKVSIDRINIAGNTKSRDKVVRR HHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHH ELRLAEGELYSSTALKRSKQNLMNTGFFEEANLVTAKGSASNKLDLNVEVKEKPTGTFSI HHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCEEEE GAGYSSLDGIIGQGSVQQANFLGLGLKMTAAASFGSKSQTYNLGLTDPYFMDSKWTIGGD CCCCHHHCCCCCCCCCCCCCEEECCEEEEEHHCCCCCCCEEECCCCCCEEECCCEEECCC IYRNERKYLDYTRRATGGDVKAGYPLSDTLSTFWLYKYEQKEIFDESPELQVNINKGTIL EECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEEECHHHHCCCCCCEEEEECCCEEE APDKTSTTSAIVASITSNTTDYRLDPSTGMMNTLSLEVAGFGGTNRYLKTITEHTLFHPL CCCCCCCHHHEEEEEECCCCCEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHH LFGVGSVRGTLGYVQGFGGKEIPIDERFYLGGISSLRGYSSRTVSPFKASDVPIIDGSGY HHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCEECCCCC GGTSLNRVYLGGEMEAVANVEYTFPLLKEAGLKAVLFFDAGNSANSLNDTFGNILTSYGA CCCCCCEEEECCCEEEEECEEEEHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCC GIRWFSPIGPLRLEYGIPINPRQGIDSGGKLEFSIGSIF CEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]