| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 308535173
Identifier: 308535173
GI number: 308535173
Start: 672288
End: 673328
Strand: Direct
Name: 308535173
Synonym: NA
Alternate gene names: NA
Gene position: 672288-673328 (Clockwise)
Preceding gene: 197116949
Following gene: 197116957
Centisome position: 14.57
GC content: 63.3
Gene sequence:
>1041_bases TTAAAGGACCACCGTCTCCCTGTGGATGCCGAACACGCCCCTCATTACGTTGGCGATCTCGCCTAAGGTAGCGTAAGTCT TTACAGCGTCGAGGATGAACGGCATCAGGTTCTGGGTCCCGCGTGCAGCCTGCTCCAGCGCCTTCAGAGAAGCCTCCACC TTGGCGTTGTCGCGACCCTCTTTCATCTTGCCAAGAGAAGCCTTCTGCTTCACCTCGACCTCGCCGGTCACCTTCAGGAG GCCTTGGGGTGCGCCCTCCTGGACGGTGAACTTGTTCACGCCCACGATGATGGTCTCGTTCTTCTCGATGGCGCGCTGGT AGGCGTAGGCGGAATCCTGGATCTCCTTCTGCTGGAACCCTCGGGAGATCGCCTCGACCGCGCCCCCAAGGGCGTCGATC TTCTCGATGTAGGCCAGCGCCTGCGCCTCGATCTTGTCGGTCAGCGCCTCGACCATGAAGGAGCCGGCCAAGGGGTCGAT GGAGTCGGCAACACCGGACTCGTAGGCGATGACCTGCTGGGTGCGCAGCGCGATCCTTACCGATTCCTCGGTGGGAAGCG CCAGCGCCTCGTCGCGGGAATTGGTGTGCAGCGACTGGGTGCCGCCCAACACGGCGGCGAGCGCCTGCAGGGTGACGCGC ATGATGTTGTTGTCGGGCTGCTGCGCGGTCAGGGTGCAGCCTGCGGTCTGGGTGTGGAAGCGCAGCATCTGCGAGCGCGG GTCTTTCGCCTTGAAGCGGTCGCGCATGATGCGGGACCACATGCGGCGGGCGGCGCGAAACTTGGCGACTTCCTCGAGCA GGTCGTTATGAGCGTTGAAGAAGAAGGCAAGGCGCGGTGCGAACTCGTCGACGTCGAGTCCCGCCTTGACCGCCGCCTCG ACGTAGGCGATGCCGTCTGCCAGGGTGAAGGCGACTTCCTGGACCGCGGAGGAACCCGCCTCCCGGATGTGGTAGCCGGA GATGCTGATGGTGTTCCACTTGGGAACGTTGTCCTTGCAGTAGGCGAAGATGTCGGTGATGATCCGCATCGACTCCTTGG G
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: isobutyryl-CoA mutase-like catalytic subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
NA
Sequences:
>Translated_347_residues LKDHRLPVDAEHAPHYVGDLA*GSVSLYSVEDERHQVLGPACSLLQRLQRSLHLGVVATLFHLAKRSLLLHLDLAGHLQE ALGCALLDGELVHAHDDGLVLLDGALVGVGGILDLLLLEPSGDRLDRAPKGVDLLDVGQRLRLDLVGQRLDHEGAGQGVD GVGNTGLVGDDLLGAQRDPYRFLGGKRQRLVAGIGVQRLGAAQHGGERLQGDAHDVVVGLLRGQGAACGLGVEAQHLRAR VFRLEAVAHDAGPHAAGGAKLGDFLEQVVMSVEEEGKARCELVDVESRLDRRLDVGDAVCQGEGDFLDRGGTRLPDVVAG DADGVPLGNVVLAVGEDVGDDPHRLLG >Mature_347_residues LKDHRLPVDAEHAPHYVGDLA*GSVSLYSVEDERHQVLGPACSLLQRLQRSLHLGVVATLFHLAKRSLLLHLDLAGHLQE ALGCALLDGELVHAHDDGLVLLDGALVGVGGILDLLLLEPSGDRLDRAPKGVDLLDVGQRLRLDLVGQRLDHEGAGQGVD GVGNTGLVGDDLLGAQRDPYRFLGGKRQRLVAGIGVQRLGAAQHGGERLQGDAHDVVVGLLRGQGAACGLGVEAQHLRAR VFRLEAVAHDAGPHAAGGAKLGDFLEQVVMSVEEEGKARCELVDVESRLDRRLDVGDAVCQGEGDFLDRGGTRLPDVVAG DADGVPLGNVVLAVGEDVGDDPHRLLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36359; Mature: 36359
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LKDHRLPVDAEHAPHYVGDLAGSVSLYSVEDERHQVLGPACSLLQRLQRSLHLGVVATLF CCCCCCCCCCCCCCHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLAKRSLLLHLDLAGHLQEALGCALLDGELVHAHDDGLVLLDGALVGVGGILDLLLLEPS HHHHHHHEEEECHHHHHHHHHHHEEECCCEEEECCCCEEEECCHHHHHHHHHHHHEECCC GDRLDRAPKGVDLLDVGQRLRLDLVGQRLDHEGAGQGVDGVGNTGLVGDDLLGAQRDPYR CCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHH FLGGKRQRLVAGIGVQRLGAAQHGGERLQGDAHDVVVGLLRGQGAACGLGVEAQHLRARV HHCCCHHHHHHHCCHHHHCCHHCCCHHCCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHH FRLEAVAHDAGPHAAGGAKLGDFLEQVVMSVEEEGKARCELVDVESRLDRRLDVGDAVCQ HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCHHHCC GEGDFLDRGGTRLPDVVAGDADGVPLGNVVLAVGEDVGDDPHRLLG CCCCHHHCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA