Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 308513318
Identifier: 308513318
GI number: 308513318
Start: 2579678
End: 2582131
Strand: Direct
Name: 308513318
Synonym: NA
Alternate gene names: NA
Gene position: 2579678-2582131 (Clockwise)
Preceding gene: 39997454
Following gene: 39997456
Centisome position: 67.63
GC content: 63.2
Gene sequence:
>2454_bases ATGGAACGATTCATCTGCATACATGGCCATTTCTACCAGCCCCCCCGGGAGAACCCCTGGCTGGAGGCGGTGGAGATCCA GGACTCGGCCCACCCCTATCACGACTGGAACGAACGGATCACCGCCGAGTGCTACGCCCCAAACGGCGCGTCGCGCCTCT TCGACGACGAAGGGCGCATTCGCGATATCGTCAGCAACTACGCCCGGATCAGCTTCAACTTCGGGCCGACGCTTCTCGCC TGGATGGAGGAGTACTCTCCCCAGGCCTACCGGGCCATACTGGAAGCGGATCGCCTGAGCATCGGCTGGCGCTCGGGCCA CGGCAACGCCGTGGCCCAGGTCTACAACCACATCATCATGCCCCTGGCGAACCGGCGGGACAAAGAGACCCAGGTGCGCT GGGGCATCGCCGATTTCGAGCGACGCTTCGGCCGCTTCCCGGAGGGGATGTGGCTGGCCGAAACGGCCGTGGATGTCGAA ACACTCGACGTGCTCGCCGCCGAGGGTATCCGCTTCACCATTCTCGCCCCGCACCAGGCCGCGCGGATGCGTGCCCGGGG CGGACGGAAATGGCATTCCGTCGAAGGGGGGCACATCGATCCGACCCGCCCCTATCTCTGTCGTCTGCCGTCGGGACGCT CCATCGTCATCTTCTTTTACGATGGTCCCATCTCCCGGGCCGTGGCCTTCGAGAAACTGCTGGACCATGGCGAGCGCTTC GCCCGGCGGCTCCTGTCCGGATTCGACGACGGCCGGCACCATGCCCAGATCCTCTCGATCGCCACGGATGGCGAGACATA CGGCCATCACCACATGCACGGCGACATGGCCTTGGCCTACGCCCTCTCATATCTGGAGGACAACGGCCTGGCCCGCCTCA CCAATTACGGGGAATTCCTGGAGCTCCACCCGCCGGGGCACGAGGTTGAGATCGTGGAGAACAGTTCCTGGAGCTGCATC CACGGCATAGAACGATGGCGCGGCGACTGCGGCTGCAACTCGGGGGGATACCCCCACTGGAACCAGCAATGGCGCGGGCC CCTGCGCCATGCCTTCGACTGGCTGAGGGATGAGCTGGCCGGACCTTACGAAATGGCGGCCGGAGCCCTTCTGCGCGATC CGTGGCAGGCCCGCGACCAGTACTTCCAGGTGATTGCCGACCGCTCCCCCGACCGATTGGAGTCCTTTGTCAATCGCCAT GCCCTGCGCCCCCTGAACGACGACGAACGAATCCGGGTCCTGATGCTCCTGGAGATGCAGCGACACCTCCTTCTGATGTA CACGAGCTGTGGCTGGTTCTTTGACGAACTCTCCGGAATCGAAACGGTGCAGGTGATCCAGTATGCCGGCCGCGCCGTCC AACTGGCACAGGAACTATTCGGCAACGGCAGTGAAACCTCGTTTCTCCAGCGGCTGGCGGCGGTGCGGGGCAACAATCCC GACTACCGTGGCGGCGCGGGAATCTATGAGGCATTCGTCCGGCCGGCAATGATCGATCTTGTCAAGGTAGGAGCCCATTT TGCGGTCAGCTCCCTATTCCAGGAGTATGGGGAGGAGACCCGAATCTTCAGCTACCGGGTGAAAAGTGAGGATGTCCGCC TGATCCCGGCGGGCCAGACCCGGCTCGCCATCGGCCGCGTGTGGGTCGGTTCGACTACCACCGGTGAAGAGGCCCGGATC ACCTACTGCGTCCTCTATTTCGGCAACCACGCCCTGAATGGCGGTGTTCGCATCTTCCGCGGCAACGAAGCTTACGAGGC CATGGTCATCGAAATTGCCAGGGCCTTTGAGTCAAGTGATTTCGCAGAGATCATCCGGCTCATGGACGCCCACTTCGGGA TGCACAACTACTCCCTGCGGGATCTGTTCCGGGACGAGCAGCGCCGGATTCTCGGCATGGTGATCGGAGGCGTGCTCACT GAGTTCGAAGACCGCTACACAGCCCTCTACGACAACTACCGCCTCCTCATGGGATTCGTCCGGCAGACCGGCATGCCGGT CCCCTACCGGTTCATGACTACTGCTCAACTGGCCCTCAACCTGAAGCTGGACCGGGCCTTCACCAAGCCCGGCATCGCCG AGGCCGAAGTGGGAGAAATCCTGCGCGAGATCGCCGACTGGGAGGTGGAGATCGAGCGGATCGACCTGGAATTCCAGATC CGCCGCAGGCTGGAAAAGGCCATGACCTGCCTGCGCGACAATCCGCTCGACAGCACCATTCTCACCGAGGCAGCCGGGCT GCTGGAACTTGCGGGCCATGTCCCCATCGACCTCAACCTCTGGCTGGCCCAGAATATCTATCTGGAGATCGCCCGGCCAC TCTGGCGCGAACTGACGGAGCGGTCCAGGGGGGGCGACACGCACAATGACTGGTGGTTCGGTCAGTTCCGCACCCTGGGC GAACGGCTCAATTTCAACGCGAATGCCGTCCTCCCCCCGGTACCGGAGGCATGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase; Family; 4-Alpha-Glucanotransferase
Number of amino acids: Translated: 817; Mature: 817
Protein sequence:
NA
Sequences:
>Translated_817_residues MERFICIHGHFYQPPRENPWLEAVEIQDSAHPYHDWNERITAECYAPNGASRLFDDEGRIRDIVSNYARISFNFGPTLLA WMEEYSPQAYRAILEADRLSIGWRSGHGNAVAQVYNHIIMPLANRRDKETQVRWGIADFERRFGRFPEGMWLAETAVDVE TLDVLAAEGIRFTILAPHQAARMRARGGRKWHSVEGGHIDPTRPYLCRLPSGRSIVIFFYDGPISRAVAFEKLLDHGERF ARRLLSGFDDGRHHAQILSIATDGETYGHHHMHGDMALAYALSYLEDNGLARLTNYGEFLELHPPGHEVEIVENSSWSCI HGIERWRGDCGCNSGGYPHWNQQWRGPLRHAFDWLRDELAGPYEMAAGALLRDPWQARDQYFQVIADRSPDRLESFVNRH ALRPLNDDERIRVLMLLEMQRHLLLMYTSCGWFFDELSGIETVQVIQYAGRAVQLAQELFGNGSETSFLQRLAAVRGNNP DYRGGAGIYEAFVRPAMIDLVKVGAHFAVSSLFQEYGEETRIFSYRVKSEDVRLIPAGQTRLAIGRVWVGSTTTGEEARI TYCVLYFGNHALNGGVRIFRGNEAYEAMVIEIARAFESSDFAEIIRLMDAHFGMHNYSLRDLFRDEQRRILGMVIGGVLT EFEDRYTALYDNYRLLMGFVRQTGMPVPYRFMTTAQLALNLKLDRAFTKPGIAEAEVGEILREIADWEVEIERIDLEFQI RRRLEKAMTCLRDNPLDSTILTEAAGLLELAGHVPIDLNLWLAQNIYLEIARPLWRELTERSRGGDTHNDWWFGQFRTLG ERLNFNANAVLPPVPEA >Mature_817_residues MERFICIHGHFYQPPRENPWLEAVEIQDSAHPYHDWNERITAECYAPNGASRLFDDEGRIRDIVSNYARISFNFGPTLLA WMEEYSPQAYRAILEADRLSIGWRSGHGNAVAQVYNHIIMPLANRRDKETQVRWGIADFERRFGRFPEGMWLAETAVDVE TLDVLAAEGIRFTILAPHQAARMRARGGRKWHSVEGGHIDPTRPYLCRLPSGRSIVIFFYDGPISRAVAFEKLLDHGERF ARRLLSGFDDGRHHAQILSIATDGETYGHHHMHGDMALAYALSYLEDNGLARLTNYGEFLELHPPGHEVEIVENSSWSCI HGIERWRGDCGCNSGGYPHWNQQWRGPLRHAFDWLRDELAGPYEMAAGALLRDPWQARDQYFQVIADRSPDRLESFVNRH ALRPLNDDERIRVLMLLEMQRHLLLMYTSCGWFFDELSGIETVQVIQYAGRAVQLAQELFGNGSETSFLQRLAAVRGNNP DYRGGAGIYEAFVRPAMIDLVKVGAHFAVSSLFQEYGEETRIFSYRVKSEDVRLIPAGQTRLAIGRVWVGSTTTGEEARI TYCVLYFGNHALNGGVRIFRGNEAYEAMVIEIARAFESSDFAEIIRLMDAHFGMHNYSLRDLFRDEQRRILGMVIGGVLT EFEDRYTALYDNYRLLMGFVRQTGMPVPYRFMTTAQLALNLKLDRAFTKPGIAEAEVGEILREIADWEVEIERIDLEFQI RRRLEKAMTCLRDNPLDSTILTEAAGLLELAGHVPIDLNLWLAQNIYLEIARPLWRELTERSRGGDTHNDWWFGQFRTLG ERLNFNANAVLPPVPEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93663; Mature: 93663
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERFICIHGHFYQPPRENPWLEAVEIQDSAHPYHDWNERITAECYAPNGASRLFDDEGRI CCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHH RDIVSNYARISFNFGPTLLAWMEEYSPQAYRAILEADRLSIGWRSGHGNAVAQVYNHIIM HHHHHCHHEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHH PLANRRDKETQVRWGIADFERRFGRFPEGMWLAETAVDVETLDVLAAEGIRFTILAPHQA HCCCCCCCCHHEECCHHHHHHHHCCCCCCCEEHHHHCCHHHHHHHHHCCEEEEEECCCHH ARMRARGGRKWHSVEGGHIDPTRPYLCRLPSGRSIVIFFYDGPISRAVAFEKLLDHGERF HHHHHCCCCCEECCCCCCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH ARRLLSGFDDGRHHAQILSIATDGETYGHHHMHGDMALAYALSYLEDNGLARLTNYGEFL HHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEE ELHPPGHEVEIVENSSWSCIHGIERWRGDCGCNSGGYPHWNQQWRGPLRHAFDWLRDELA EECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHC GPYEMAAGALLRDPWQARDQYFQVIADRSPDRLESFVNRHALRPLNDDERIRVLMLLEMQ CCHHHHCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHH RHLLLMYTSCGWFFDELSGIETVQVIQYAGRAVQLAQELFGNGSETSFLQRLAAVRGNNP HHHEEHHHHCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC DYRGGAGIYEAFVRPAMIDLVKVGAHFAVSSLFQEYGEETRIFSYRVKSEDVRLIPAGQT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCC RLAIGRVWVGSTTTGEEARITYCVLYFGNHALNGGVRIFRGNEAYEAMVIEIARAFESSD EEEEEEEEECCCCCCCCCEEEEEEEEECCEECCCCEEEEECCCHHHHHHHHHHHHHCCCC FAEIIRLMDAHFGMHNYSLRDLFRDEQRRILGMVIGGVLTEFEDRYTALYDNYRLLMGFV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQTGMPVPYRFMTTAQLALNLKLDRAFTKPGIAEAEVGEILREIADWEVEIERIDLEFQI HHCCCCCCCHHHEEEEHHEEEEEHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEECHHHHH RRRLEKAMTCLRDNPLDSTILTEAAGLLELAGHVPIDLNLWLAQNIYLEIARPLWRELTE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH RSRGGDTHNDWWFGQFRTLGERLNFNANAVLPPVPEA HHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MERFICIHGHFYQPPRENPWLEAVEIQDSAHPYHDWNERITAECYAPNGASRLFDDEGRI CCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHH RDIVSNYARISFNFGPTLLAWMEEYSPQAYRAILEADRLSIGWRSGHGNAVAQVYNHIIM HHHHHCHHEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHH PLANRRDKETQVRWGIADFERRFGRFPEGMWLAETAVDVETLDVLAAEGIRFTILAPHQA HCCCCCCCCHHEECCHHHHHHHHCCCCCCCEEHHHHCCHHHHHHHHHCCEEEEEECCCHH ARMRARGGRKWHSVEGGHIDPTRPYLCRLPSGRSIVIFFYDGPISRAVAFEKLLDHGERF HHHHHCCCCCEECCCCCCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH ARRLLSGFDDGRHHAQILSIATDGETYGHHHMHGDMALAYALSYLEDNGLARLTNYGEFL HHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEE ELHPPGHEVEIVENSSWSCIHGIERWRGDCGCNSGGYPHWNQQWRGPLRHAFDWLRDELA EECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHC GPYEMAAGALLRDPWQARDQYFQVIADRSPDRLESFVNRHALRPLNDDERIRVLMLLEMQ CCHHHHCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHH RHLLLMYTSCGWFFDELSGIETVQVIQYAGRAVQLAQELFGNGSETSFLQRLAAVRGNNP HHHEEHHHHCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC DYRGGAGIYEAFVRPAMIDLVKVGAHFAVSSLFQEYGEETRIFSYRVKSEDVRLIPAGQT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCC RLAIGRVWVGSTTTGEEARITYCVLYFGNHALNGGVRIFRGNEAYEAMVIEIARAFESSD EEEEEEEEECCCCCCCCCEEEEEEEEECCEECCCCEEEEECCCHHHHHHHHHHHHHCCCC FAEIIRLMDAHFGMHNYSLRDLFRDEQRRILGMVIGGVLTEFEDRYTALYDNYRLLMGFV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQTGMPVPYRFMTTAQLALNLKLDRAFTKPGIAEAEVGEILREIADWEVEIERIDLEFQI HHCCCCCCCHHHEEEEHHEEEEEHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEECHHHHH RRRLEKAMTCLRDNPLDSTILTEAAGLLELAGHVPIDLNLWLAQNIYLEIARPLWRELTE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH RSRGGDTHNDWWFGQFRTLGERLNFNANAVLPPVPEA HHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA