Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is pheT
Identifier: 304570505
GI number: 304570505
Start: 3948506
End: 3950932
Strand: Reverse
Name: pheT
Synonym: NA
Alternate gene names: 304570505
Gene position: 3950932-3948506 (Counterclockwise)
Preceding gene: 45659042
Following gene: 45659040
Centisome position: 92.37
GC content: 35.64
Gene sequence:
>2427_bases GTGAAACTTTCTTTAGATTGGATGAACGATTTTACACCTTTGAAGGAGGTGGGACTCGATGCAATTTTAAAGAAGATTGC GATTTCTGTTTGTGAGATCGACGACGCGACGGAGTTTCGTCCCGAATTGGATTTTGTAAAAATTGTTCGAATCGAATCTC TGGAAAAACATCCTTCTGCGGATAAACTTCAAATAGCCCAGGTTTTTGATGGAAGTTCTAAATCTCAAATTGTTACCGGA GTAACTAACGTAAAAATAGGCGATTTGGTCCCTCTAGCGATTCCGGGAGCAAAATTAGGAGACAAAGAAATTTTAGAATC TGAACTTAGAGGAGTTAAAAGTTCAGGAATGTTATGTTCCGAAAAAGAACTTTTTTTGTCGGAAGAGGGTAATGGTGTTT GGATTTTAAACGGGTTAGATCAAGCCGAAGTCGGTAAGACAATCCGTTCATTTTTATATTATAATGATATTATATTCGAA GTTGATAATAAATCTATCACACATAGGCCAGATCTTTGGAGTCACTTCGGTTTTGCAAGAGAACTCGCTTCTCAACTTCG TTTACCGATAGTTTTTAATCCTTTCGAATCTCTTTGGAATTTCGACTTATCAGTCAAACTTCCGAAAGTATTAGAAAATC AGAATGCGCATTCTTACTATGCGTCTTCTATTTCTGGGGTTTCTGTCTTTCCTTCGAAAAGAAAATTTCAATCCAGATTG CAAAAATGTGGGGTTAGAGTGATTAACAATGTAGTGGATGTTTCCAATTATGTAATGTTGGAAATGGGCCAGCCTACTCA TTTTTTTGATAAGAAGTTTTTAGAAAACCAAGGTGGAATTTCTCTCGAAGTTTCCTTTGCAAAAAAAGGGGAAAGTTTTG CACTTTTAGACGAGACCTCTCCAGCTTTAGAAGAGGAAGTTTTGCTGATTCGTAATCAAGGGAAACCTGTGGCAATTGCA GGTGTAATGGGCGGTAAAGAATCTGCTGTACAAAATACTACGACGGAAATCGTGATGGAATCCGCAGTCTTTATGAGAGA AAGGATTCGTAAGTCTATACGTTCCACAGGTATCCGATCCGATTCTTCTGTTCGTTACGAAAAAGGACTGGAGGCGACTA CAACTCTTCCTGTAATTCGTCGTGCGCTCAATCTTTTAAAAGAAAATGGTTGTTCCGAATTGAAAGCGAGCGAACCTGTG GGTTTTTTACATATTCCTCATAAAGAAGTTCGTATTCATACGGACATTCATTTTATTAATGCGAAGTTAGGCGTTACCTT GTCTCAAGGAGACATTACGGATATATTAGAAAGATTGCATTTTATAGTTTCTTGGAAAGGGGAACATCTGGAAGTTTTAG TTCCTAAATTTCGTCATAATTATGACGTGACTATCCCGGAGGATCTTGTAGAGGAAATTGGAAGAACCAAAGGTTACGAT ACAATCCAAGTCTCTCCTTTATTAGCGGAGGTTAAAACTCCAATTCGAAATTTAAATAGAGAATTGGAAAGAAAGTGCAA AACTTTTTTTGCCATAGCTTTAAAATATCATGAAGTTTTTAATTATTCTTTTCAATCTTATAAAGAAAATGAATTTTCTG GAGATCCTAAACTTTCGGTAAAAATTAAGAATGAAATGCCAGAAGAACAATCCGTTCTGAGAAATTCGCTTTTACCCTCT TTGTTAAAAAATACTCGCACCAATCAAGATCGATTTTCGGAGATTAAAATTTTTGAATTTGGCCGAGTGTATTTTAATCT TCCAGAACCAGAAAACGAGAAGAAAATTTTTGCTTTTGCAGTTTCTTTAGATAAAAAAAGTTCCGAGCCTGATTTAAAAC TTTTAGAAGAAGATTTTTTAAAAATAAAAAAGGAAGTAGAATCTTTTCTAGAGTCCATTCAGATTTATGAATATACTTGG AAAATACAACAAGAAACTATCTTTCATCCAGGTGCAAATCTGTGTTTGGTGGCGAGATCCGGAAAAGATGGTTTAGAAAC CATTGTAGGTAATTTAGGATATGTTCACCCTGCGATTTTAGATTCTTTCGAACTTAAAAAAAGGGTAATTTACGGTTCTT TTGAATTTGAACGGATTGTAGAACTTTGGAATCAAAATCGGAAAGTTTCCCGTTTTGTGACTCCTTCCCAATTTCCGGAA GCAGAAATTGATCTTTCAATTTTGGTTGGAGAAAAAGAAAATACGAACGTATTTACAGATCTTGTAAAATTGGAAAGAAT TCCTGAGCTAAAAGAAGGTTGGGTATATTCTCAATTCATGGGTGGAAATGTTCCGGAAGGAAAAAAGTCAGTGAGTTATC GTTTTCGATTAGTGAACTATGAAAGAACTTTTACCCAAGAAAGAATCAAAGAAATTTCGGATCAGTTAGTTATTCTTGCG GGAAAAAATGGATTTGTATTGAGATAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS
Number of amino acids: Translated: 808; Mature: 808
Protein sequence:
NA
Sequences:
>Translated_808_residues MKLSLDWMNDFTPLKEVGLDAILKKIAISVCEIDDATEFRPELDFVKIVRIESLEKHPSADKLQIAQVFDGSSKSQIVTG VTNVKIGDLVPLAIPGAKLGDKEILESELRGVKSSGMLCSEKELFLSEEGNGVWILNGLDQAEVGKTIRSFLYYNDIIFE VDNKSITHRPDLWSHFGFARELASQLRLPIVFNPFESLWNFDLSVKLPKVLENQNAHSYYASSISGVSVFPSKRKFQSRL QKCGVRVINNVVDVSNYVMLEMGQPTHFFDKKFLENQGGISLEVSFAKKGESFALLDETSPALEEEVLLIRNQGKPVAIA GVMGGKESAVQNTTTEIVMESAVFMRERIRKSIRSTGIRSDSSVRYEKGLEATTTLPVIRRALNLLKENGCSELKASEPV GFLHIPHKEVRIHTDIHFINAKLGVTLSQGDITDILERLHFIVSWKGEHLEVLVPKFRHNYDVTIPEDLVEEIGRTKGYD TIQVSPLLAEVKTPIRNLNRELERKCKTFFAIALKYHEVFNYSFQSYKENEFSGDPKLSVKIKNEMPEEQSVLRNSLLPS LLKNTRTNQDRFSEIKIFEFGRVYFNLPEPENEKKIFAFAVSLDKKSSEPDLKLLEEDFLKIKKEVESFLESIQIYEYTW KIQQETIFHPGANLCLVARSGKDGLETIVGNLGYVHPAILDSFELKKRVIYGSFEFERIVELWNQNRKVSRFVTPSQFPE AEIDLSILVGEKENTNVFTDLVKLERIPELKEGWVYSQFMGGNVPEGKKSVSYRFRLVNYERTFTQERIKEISDQLVILA GKNGFVLR >Mature_808_residues MKLSLDWMNDFTPLKEVGLDAILKKIAISVCEIDDATEFRPELDFVKIVRIESLEKHPSADKLQIAQVFDGSSKSQIVTG VTNVKIGDLVPLAIPGAKLGDKEILESELRGVKSSGMLCSEKELFLSEEGNGVWILNGLDQAEVGKTIRSFLYYNDIIFE VDNKSITHRPDLWSHFGFARELASQLRLPIVFNPFESLWNFDLSVKLPKVLENQNAHSYYASSISGVSVFPSKRKFQSRL QKCGVRVINNVVDVSNYVMLEMGQPTHFFDKKFLENQGGISLEVSFAKKGESFALLDETSPALEEEVLLIRNQGKPVAIA GVMGGKESAVQNTTTEIVMESAVFMRERIRKSIRSTGIRSDSSVRYEKGLEATTTLPVIRRALNLLKENGCSELKASEPV GFLHIPHKEVRIHTDIHFINAKLGVTLSQGDITDILERLHFIVSWKGEHLEVLVPKFRHNYDVTIPEDLVEEIGRTKGYD TIQVSPLLAEVKTPIRNLNRELERKCKTFFAIALKYHEVFNYSFQSYKENEFSGDPKLSVKIKNEMPEEQSVLRNSLLPS LLKNTRTNQDRFSEIKIFEFGRVYFNLPEPENEKKIFAFAVSLDKKSSEPDLKLLEEDFLKIKKEVESFLESIQIYEYTW KIQQETIFHPGANLCLVARSGKDGLETIVGNLGYVHPAILDSFELKKRVIYGSFEFERIVELWNQNRKVSRFVTPSQFPE AEIDLSILVGEKENTNVFTDLVKLERIPELKEGWVYSQFMGGNVPEGKKSVSYRFRLVNYERTFTQERIKEISDQLVILA GKNGFVLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain
Homologues:
Organism=Escherichia coli, GI1788006, Length=804, Percent_Identity=29.1044776119403, Blast_Score=270, Evalue=3e-73,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYFB_LEPIC (Q72MG8)
Other databases:
- EMBL: AE016823 - ProteinModelPortal: Q72MG8 - SMR: Q72MG8 - GenomeReviews: AE016823_GR - KEGG: lic:LIC13219 - NMPDR: fig|267671.1.peg.3127 - HOGENOM: HBG527910 - OMA: ELERKCK - ProtClustDB: PRK00629 - BioCyc: LINT267671:LIC_13219-MONOMER - GO: GO:0005737 - HAMAP: MF_00283 - InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 - Gene3D: G3DSA:3.50.40.10 - Gene3D: G3DSA:3.30.56.20 - Gene3D: G3DSA:3.30.70.380 - Gene3D: G3DSA:2.40.50.140 - SMART: SM00873 - SMART: SM00874 - SMART: SM00896 - TIGRFAMs: TIGR00472
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind; SSF56037 B3_4; SSF54991 Fdx_AntiC_bd; SSF50249 Nucleic_acid_OB; SSF46955 Putativ_DNA_bind
EC number: =6.1.1.20
Molecular weight: Translated: 92051; Mature: 92051
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS51483 B5; PS51447 FDX_ACB; PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSLDWMNDFTPLKEVGLDAILKKIAISVCEIDDATEFRPELDFVKIVRIESLEKHPSA CEEECCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHCCCCC DKLQIAQVFDGSSKSQIVTGVTNVKIGDLVPLAIPGAKLGDKEILESELRGVKSSGMLCS CCEEEEHHHCCCCCCEEEEEECCEEECCEEEEECCCCCCCCHHHHHHHHCCCCCCCCEEC EKELFLSEEGNGVWILNGLDQAEVGKTIRSFLYYNDIIFEVDNKSITHRPDLWSHFGFAR CCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHHHHHHH ELASQLRLPIVFNPFESLWNFDLSVKLPKVLENQNAHSYYASSISGVSVFPSKRKFQSRL HHHHHCCCCEEECCHHHHHCCCCEEECHHHHCCCCCCHHHHHCCCCCEECCCHHHHHHHH QKCGVRVINNVVDVSNYVMLEMGQPTHFFDKKFLENQGGISLEVSFAKKGESFALLDETS HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCC PALEEEVLLIRNQGKPVAIAGVMGGKESAVQNTTTEIVMESAVFMRERIRKSIRSTGIRS CCHHHCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DSSVRYEKGLEATTTLPVIRRALNLLKENGCSELKASEPVGFLHIPHKEVRIHTDIHFIN CCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEE AKLGVTLSQGDITDILERLHFIVSWKGEHLEVLVPKFRHNYDVTIPEDLVEEIGRTKGYD EEEEEEECCCCHHHHHHHHHHHEECCCCCEEEEEHHHCCCCCCCCCHHHHHHHHCCCCCC TIQVSPLLAEVKTPIRNLNRELERKCKTFFAIALKYHEVFNYSFQSYKENEFSGDPKLSV EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE KIKNEMPEEQSVLRNSLLPSLLKNTRTNQDRFSEIKIFEFGRVYFNLPEPENEKKIFAFA EECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCEEEEEEECEEEEECCCCCCCCEEEEEE VSLDKKSSEPDLKLLEEDFLKIKKEVESFLESIQIYEYTWKIQQETIFHPGANLCLVARS EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCEEECCCCCEEEEEEC GKDGLETIVGNLGYVHPAILDSFELKKRVIYGSFEFERIVELWNQNRKVSRFVTPSQFPE CCHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCEEECCCCCCCCC AEIDLSILVGEKENTNVFTDLVKLERIPELKEGWVYSQFMGGNVPEGKKSVSYRFRLVNY CCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHCCEEEHHCCCCCCCCCCCEEEEEEEEEC ERTFTQERIKEISDQLVILAGKNGFVLR HHHHHHHHHHHHCCCEEEEECCCCCEEC >Mature Secondary Structure MKLSLDWMNDFTPLKEVGLDAILKKIAISVCEIDDATEFRPELDFVKIVRIESLEKHPSA CEEECCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHCCCCC DKLQIAQVFDGSSKSQIVTGVTNVKIGDLVPLAIPGAKLGDKEILESELRGVKSSGMLCS CCEEEEHHHCCCCCCEEEEEECCEEECCEEEEECCCCCCCCHHHHHHHHCCCCCCCCEEC EKELFLSEEGNGVWILNGLDQAEVGKTIRSFLYYNDIIFEVDNKSITHRPDLWSHFGFAR CCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHHHHHHH ELASQLRLPIVFNPFESLWNFDLSVKLPKVLENQNAHSYYASSISGVSVFPSKRKFQSRL HHHHHCCCCEEECCHHHHHCCCCEEECHHHHCCCCCCHHHHHCCCCCEECCCHHHHHHHH QKCGVRVINNVVDVSNYVMLEMGQPTHFFDKKFLENQGGISLEVSFAKKGESFALLDETS HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCC PALEEEVLLIRNQGKPVAIAGVMGGKESAVQNTTTEIVMESAVFMRERIRKSIRSTGIRS CCHHHCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DSSVRYEKGLEATTTLPVIRRALNLLKENGCSELKASEPVGFLHIPHKEVRIHTDIHFIN CCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEE AKLGVTLSQGDITDILERLHFIVSWKGEHLEVLVPKFRHNYDVTIPEDLVEEIGRTKGYD EEEEEEECCCCHHHHHHHHHHHEECCCCCEEEEEHHHCCCCCCCCCHHHHHHHHCCCCCC TIQVSPLLAEVKTPIRNLNRELERKCKTFFAIALKYHEVFNYSFQSYKENEFSGDPKLSV EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE KIKNEMPEEQSVLRNSLLPSLLKNTRTNQDRFSEIKIFEFGRVYFNLPEPENEKKIFAFA EECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCEEEEEEECEEEEECCCCCCCCEEEEEE VSLDKKSSEPDLKLLEEDFLKIKKEVESFLESIQIYEYTWKIQQETIFHPGANLCLVARS EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCEEECCCCCEEEEEEC GKDGLETIVGNLGYVHPAILDSFELKKRVIYGSFEFERIVELWNQNRKVSRFVTPSQFPE CCHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCEEECCCCCCCCC AEIDLSILVGEKENTNVFTDLVKLERIPELKEGWVYSQFMGGNVPEGKKSVSYRFRLVNY CCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHCCEEEHHCCCCCCCCCCCEEEEEEEEEC ERTFTQERIKEISDQLVILAGKNGFVLR HHHHHHHHHHHHCCCEEEEECCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA