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The map label for this gene is ymfN [H]

Identifier: 30263956

GI number: 30263956

Start: 3769382

End: 3771070

Strand: Reverse

Name: ymfN [H]

Synonym: BA_4094

Alternate gene names: 30263956

Gene position: 3771070-3769382 (Counterclockwise)

Preceding gene: 30263957

Following gene: 30263955

Centisome position: 72.14

GC content: 34.34

Gene sequence:

>1689_bases
TTGATCGATCCATCTCCTGAACTAAGAACAACATGGTATGCTGGACAAGTTGTGAAAGGAAACATAATAGCTAGTAAGAA
AAACATCTTGTCTTGTCAACGTCATCTAAATGATTTAAAGAGACAGGGGACTGAGGAGTTTCCTTGGATATTTGATGAAG
AAAAGGCTCATAGACCAATACGATATATCGAAAAATTTTGTCGTCCATCAAAAGGTGACTATAAAAGGTTAGTTCTTCAA
CCGTGGCAACACTTTGTTATAGGTTCTTTATATGGATGGATTCATAAGGATACTGGTTATAGGCGCTTTCGTGAGGGCCT
TATTTTTATTGGACGTAAAAATGGGAAAACGACAATGATTTCTGGTTTGTCTAATTATGCTGTTGCTAAAGATAATGAGC
CAGGTGCTCGTGTTTATGTTTTGGCAAATACAAAACAACAAGCTGGAGAATTGTTTGATGAAAGTCGTGCAATGGTTCAA
AAATCCCCCCTTCTTCGGAAGCATTTACGTGAAAATCAGAAAGGCATTTTCCATGATAAAACGCATTCTAAAATTGAACC
TCGTGCATCTGACAGTAAGAAGCTAGACGGATTAAATACACATCTTGGTATTTTTGATGAAATACATGAATTTAAGAATT
TTAAGCTAATCAATGTTATTAAAAAATCACGTGGTGCACGTAAACAACCAATGATTGTTTATATCACTACAGCAGGATAT
CAGCTTGAAGGACCGCTTGTTCAATACTATGAAATTGCAACGGATGTTTTGGAAGGAGTTATCGACCAAGATAGAAAGTT
TTATTTCATGGCTGAAATGGATAGTGTAGATGAAATTGAGAATCCTGAACTATGGATTAAAGCAAACCCTAATATGGGAG
TTTCGCTAGACCTTCCATCGCTTATTGATGATTGGAATACAGACAAGCATACAGATGCTGAAAAAAATGACTGGATTACA
AAGCAATTTAACATCTTTGTTGATAATGATGAAATGTCCTTTGTTGGTATTGAGATATTAAAAAGGAATGAAGAAGTTAT
TGATATAAAGGGATTAGCTGGTAAAGAATGTGTTGCAGGTTATGATTTATCTGCAACAGAAGATTTTACAAGTGCTTGTT
TAGAGTTTCCTTTAGATGATGGAAATGTTTTTGTATTATCTCATAGTTGGGTTCCGCAGGCTAAAGTTGATCGTGATAAC
GAAAATATTAGCTTTAAAGAGTTTAAAGAAAAAGGTTGGCTCACCATTATCCCTGGTGAGTATGTGAAATATGAGTATGT
GTATGATTGGTTTGTTGAGCAATCTGAACACTATTTCATAAAGAAAATTACTTATGATCCAGCAAATGCTTATCGTTTAA
ATGAAGATTTGAAAGCGTATGGATTTAAAACTGAACCAGTTCGACAAGGTCATTTAACTTTAAGCCCAGCATTAAAGGAT
GTAAAAGAATTGTTGTTGGATGGAAAAATAATTAGTAATAAAAACCGTCTTTTCCGTTGGTATATGAACAATGTAAAGCT
TGTGGAAGACAGGAACGGGAACTTTTTACCATCTAAACAGAGTAAATATCGAAAAATTGATGGCTTTGCAGCGTTTTTAA
ATGCTCACACAGAAGTAATCCCTATGTTATCTCAATTACAAGGTGATGGAAATATTGAATTTATATCAGTTAACGATCTT
TTTAAATAG

Upstream 100 bases:

>100_bases
ACTGGAGATTCTGATGATGATTACGACAACTTCTAAGCCATCTGAAATAGCTAAGTGGTATAAAAATTGGCGAAATGAAC
AGATACAGCATTTTAATATT

Downstream 100 bases:

>100_bases
AAAGGCGGTGAGAAATTGAAGCTGATTAATCGTTTTAAGGGAGCCATTAAAGGAGCTTCATTGGGATGGAAAGGTGCTGG
GTATAACTTCACTTCTTGGT

Product: prophage LambdaBa02, terminase, large subunit, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MIDPSPELRTTWYAGQVVKGNIIASKKNILSCQRHLNDLKRQGTEEFPWIFDEEKAHRPIRYIEKFCRPSKGDYKRLVLQ
PWQHFVIGSLYGWIHKDTGYRRFREGLIFIGRKNGKTTMISGLSNYAVAKDNEPGARVYVLANTKQQAGELFDESRAMVQ
KSPLLRKHLRENQKGIFHDKTHSKIEPRASDSKKLDGLNTHLGIFDEIHEFKNFKLINVIKKSRGARKQPMIVYITTAGY
QLEGPLVQYYEIATDVLEGVIDQDRKFYFMAEMDSVDEIENPELWIKANPNMGVSLDLPSLIDDWNTDKHTDAEKNDWIT
KQFNIFVDNDEMSFVGIEILKRNEEVIDIKGLAGKECVAGYDLSATEDFTSACLEFPLDDGNVFVLSHSWVPQAKVDRDN
ENISFKEFKEKGWLTIIPGEYVKYEYVYDWFVEQSEHYFIKKITYDPANAYRLNEDLKAYGFKTEPVRQGHLTLSPALKD
VKELLLDGKIISNKNRLFRWYMNNVKLVEDRNGNFLPSKQSKYRKIDGFAAFLNAHTEVIPMLSQLQGDGNIEFISVNDL
FK

Sequences:

>Translated_562_residues
MIDPSPELRTTWYAGQVVKGNIIASKKNILSCQRHLNDLKRQGTEEFPWIFDEEKAHRPIRYIEKFCRPSKGDYKRLVLQ
PWQHFVIGSLYGWIHKDTGYRRFREGLIFIGRKNGKTTMISGLSNYAVAKDNEPGARVYVLANTKQQAGELFDESRAMVQ
KSPLLRKHLRENQKGIFHDKTHSKIEPRASDSKKLDGLNTHLGIFDEIHEFKNFKLINVIKKSRGARKQPMIVYITTAGY
QLEGPLVQYYEIATDVLEGVIDQDRKFYFMAEMDSVDEIENPELWIKANPNMGVSLDLPSLIDDWNTDKHTDAEKNDWIT
KQFNIFVDNDEMSFVGIEILKRNEEVIDIKGLAGKECVAGYDLSATEDFTSACLEFPLDDGNVFVLSHSWVPQAKVDRDN
ENISFKEFKEKGWLTIIPGEYVKYEYVYDWFVEQSEHYFIKKITYDPANAYRLNEDLKAYGFKTEPVRQGHLTLSPALKD
VKELLLDGKIISNKNRLFRWYMNNVKLVEDRNGNFLPSKQSKYRKIDGFAAFLNAHTEVIPMLSQLQGDGNIEFISVNDL
FK
>Mature_562_residues
MIDPSPELRTTWYAGQVVKGNIIASKKNILSCQRHLNDLKRQGTEEFPWIFDEEKAHRPIRYIEKFCRPSKGDYKRLVLQ
PWQHFVIGSLYGWIHKDTGYRRFREGLIFIGRKNGKTTMISGLSNYAVAKDNEPGARVYVLANTKQQAGELFDESRAMVQ
KSPLLRKHLRENQKGIFHDKTHSKIEPRASDSKKLDGLNTHLGIFDEIHEFKNFKLINVIKKSRGARKQPMIVYITTAGY
QLEGPLVQYYEIATDVLEGVIDQDRKFYFMAEMDSVDEIENPELWIKANPNMGVSLDLPSLIDDWNTDKHTDAEKNDWIT
KQFNIFVDNDEMSFVGIEILKRNEEVIDIKGLAGKECVAGYDLSATEDFTSACLEFPLDDGNVFVLSHSWVPQAKVDRDN
ENISFKEFKEKGWLTIIPGEYVKYEYVYDWFVEQSEHYFIKKITYDPANAYRLNEDLKAYGFKTEPVRQGHLTLSPALKD
VKELLLDGKIISNKNRLFRWYMNNVKLVEDRNGNFLPSKQSKYRKIDGFAAFLNAHTEVIPMLSQLQGDGNIEFISVNDL
FK

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 65105; Mature: 65105

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPSPELRTTWYAGQVVKGNIIASKKNILSCQRHLNDLKRQGTEEFPWIFDEEKAHRPI
CCCCCCCCEEEEEECEEEECCEEECHHHHHHHHHHHHHHHHCCCCCCCEEECCHHCCCCH
RYIEKFCRPSKGDYKRLVLQPWQHFVIGSLYGWIHKDTGYRRFREGLIFIGRKNGKTTMI
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEECCCCCEEEE
SGLSNYAVAKDNEPGARVYVLANTKQQAGELFDESRAMVQKSPLLRKHLRENQKGIFHDK
ECCCCCEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEECC
THSKIEPRASDSKKLDGLNTHLGIFDEIHEFKNFKLINVIKKSRGARKQPMIVYITTAGY
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCE
QLEGPLVQYYEIATDVLEGVIDQDRKFYFMAEMDSVDEIENPELWIKANPNMGVSLDLPS
EECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCEEECCHH
LIDDWNTDKHTDAEKNDWITKQFNIFVDNDEMSFVGIEILKRNEEVIDIKGLAGKECVAG
HHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCC
YDLSATEDFTSACLEFPLDDGNVFVLSHSWVPQAKVDRDNENISFKEFKEKGWLTIIPGE
CCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCC
YVKYEYVYDWFVEQSEHYFIKKITYDPANAYRLNEDLKAYGFKTEPVRQGHLTLSPALKD
CEEEEEEEEEECCCCCCEEEEEEEECCCCCEEECCCHHHCCCCCCCCCCCCEEECHHHHH
VKELLLDGKIISNKNRLFRWYMNNVKLVEDRNGNFLPSKQSKYRKIDGFAAFLNAHTEVI
HHHHHHCCEEECCCCCEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
PMLSQLQGDGNIEFISVNDLFK
HHHHHHCCCCCEEEEECCCCCC
>Mature Secondary Structure
MIDPSPELRTTWYAGQVVKGNIIASKKNILSCQRHLNDLKRQGTEEFPWIFDEEKAHRPI
CCCCCCCCEEEEEECEEEECCEEECHHHHHHHHHHHHHHHHCCCCCCCEEECCHHCCCCH
RYIEKFCRPSKGDYKRLVLQPWQHFVIGSLYGWIHKDTGYRRFREGLIFIGRKNGKTTMI
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEECCCCCEEEE
SGLSNYAVAKDNEPGARVYVLANTKQQAGELFDESRAMVQKSPLLRKHLRENQKGIFHDK
ECCCCCEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEECC
THSKIEPRASDSKKLDGLNTHLGIFDEIHEFKNFKLINVIKKSRGARKQPMIVYITTAGY
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCE
QLEGPLVQYYEIATDVLEGVIDQDRKFYFMAEMDSVDEIENPELWIKANPNMGVSLDLPS
EECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCEEECCHH
LIDDWNTDKHTDAEKNDWITKQFNIFVDNDEMSFVGIEILKRNEEVIDIKGLAGKECVAG
HHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCC
YDLSATEDFTSACLEFPLDDGNVFVLSHSWVPQAKVDRDNENISFKEFKEKGWLTIIPGE
CCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCC
YVKYEYVYDWFVEQSEHYFIKKITYDPANAYRLNEDLKAYGFKTEPVRQGHLTLSPALKD
CEEEEEEEEEECCCCCCEEEEEEEECCCCCEEECCCHHHCCCCCCCCCCCCEEECHHHHH
VKELLLDGKIISNKNRLFRWYMNNVKLVEDRNGNFLPSKQSKYRKIDGFAAFLNAHTEVI
HHHHHHCCEEECCCCCEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
PMLSQLQGDGNIEFISVNDLFK
HHHHHHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]