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The map label for this gene is yloC [H]

Identifier: 30263876

GI number: 30263876

Start: 3688974

End: 3689849

Strand: Reverse

Name: yloC [H]

Synonym: BA_4011

Alternate gene names: 30263876

Gene position: 3689849-3688974 (Counterclockwise)

Preceding gene: 30263877

Following gene: 30263875

Centisome position: 70.59

GC content: 34.82

Gene sequence:

>876_bases
ATGATTTGTAGTATGACAGGATTTGGAAGGTCGAAAGTAGAAAGTGATACTTTTCAAATTACAGTAGAAATGAAATCAGT
GAACCACCGTTTTCTAGAGATGAGTATTCGACTACCGAAGCAGATGATGGTATTTGAAGACAAAATTCGTAAAATAATTG
CACAGCAAGTTCGCCGTGGACGCATTGAAGTGTCTATTAGTATAGCGGGTGAAGGGCTTGTTGAAAGAAAATTAAGTGTG
AATTGGTCGCTTCTTGAGCAGTACCAATCAATTATGGAAGATATAAAAGGAAAATTTCAATTACAAGATTCTATTACACT
CGAGCAATTAATGGCAATGCCAGAAGTAACAGCGATTGAAGAGGTAGAAAACGTAAATGAACAATTTGAGAACAGTTTAT
ATGAGGCTGTTCGCCAAGCTGCTCATATGTTAAAAACGATGAGAGATGGCGAAGGAGAACGATTACATAAAGATATAGCG
TATCGTTTACAAGAGATTCACAATTGTGTAAATGCGATTATTCCGCATGCACCAATTGTTACAAAAAAATATCGTGAACG
ATTAGAAAATCGCTTAAAAGAATTACATAATCAAGATCTAGATGAACAAAGATTGCTAACAGAAGTTGCAATCTTTGCTG
AACGTTGTGATATTCACGAAGAGTTAGTTCGTTTGCAAAGTCATTTAGAACAATTCCGTGAAACACTGCAGATTGAAGAA
CCTGTTGGAAGGAAAATGGATTTCATCGTGCAAGAGATGCATAGAGAAATTAATACGATTGGTTCTAAGGCAAATGACTT
AACAATTTCAAAATATGTTGTAGAAATGAAAAATAACCTTGAAAAAATTCGTGAACAAGTACAAAATATTGAGTAG

Upstream 100 bases:

>100_bases
TCAATGATATGAAAATGTGATATAATTTACAGAAGGTAGTAGAGCCTTGTCTCTATTACCTTTTTCATTGAGTTATTTCA
TGGCTTGGATGTGATAAAAA

Downstream 100 bases:

>100_bases
CTTTCAAAAAATATATAAAGTTATACGTGGTGGAGAAATCGGATAGACTTACTAGGAGGCGCAAACTATGGCCATGCGGT
TTTTAAATATTGGATACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MICSMTGFGRSKVESDTFQITVEMKSVNHRFLEMSIRLPKQMMVFEDKIRKIIAQQVRRGRIEVSISIAGEGLVERKLSV
NWSLLEQYQSIMEDIKGKFQLQDSITLEQLMAMPEVTAIEEVENVNEQFENSLYEAVRQAAHMLKTMRDGEGERLHKDIA
YRLQEIHNCVNAIIPHAPIVTKKYRERLENRLKELHNQDLDEQRLLTEVAIFAERCDIHEELVRLQSHLEQFRETLQIEE
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE

Sequences:

>Translated_291_residues
MICSMTGFGRSKVESDTFQITVEMKSVNHRFLEMSIRLPKQMMVFEDKIRKIIAQQVRRGRIEVSISIAGEGLVERKLSV
NWSLLEQYQSIMEDIKGKFQLQDSITLEQLMAMPEVTAIEEVENVNEQFENSLYEAVRQAAHMLKTMRDGEGERLHKDIA
YRLQEIHNCVNAIIPHAPIVTKKYRERLENRLKELHNQDLDEQRLLTEVAIFAERCDIHEELVRLQSHLEQFRETLQIEE
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE
>Mature_291_residues
MICSMTGFGRSKVESDTFQITVEMKSVNHRFLEMSIRLPKQMMVFEDKIRKIIAQQVRRGRIEVSISIAGEGLVERKLSV
NWSLLEQYQSIMEDIKGKFQLQDSITLEQLMAMPEVTAIEEVENVNEQFENSLYEAVRQAAHMLKTMRDGEGERLHKDIA
YRLQEIHNCVNAIIPHAPIVTKKYRERLENRLKELHNQDLDEQRLLTEVAIFAERCDIHEELVRLQSHLEQFRETLQIEE
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=303, Percent_Identity=30.6930693069307, Blast_Score=131, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 34166; Mature: 34166

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00283 SOYBEAN_KUNITZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICSMTGFGRSKVESDTFQITVEMKSVNHRFLEMSIRLPKQMMVFEDKIRKIIAQQVRRG
CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
RIEVSISIAGEGLVERKLSVNWSLLEQYQSIMEDIKGKFQLQDSITLEQLMAMPEVTAIE
CEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCHHHHH
EVENVNEQFENSLYEAVRQAAHMLKTMRDGEGERLHKDIAYRLQEIHNCVNAIIPHAPIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TKKYRERLENRLKELHNQDLDEQRLLTEVAIFAERCDIHEELVRLQSHLEQFRETLQIEE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MICSMTGFGRSKVESDTFQITVEMKSVNHRFLEMSIRLPKQMMVFEDKIRKIIAQQVRRG
CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
RIEVSISIAGEGLVERKLSVNWSLLEQYQSIMEDIKGKFQLQDSITLEQLMAMPEVTAIE
CEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCHHHHH
EVENVNEQFENSLYEAVRQAAHMLKTMRDGEGERLHKDIAYRLQEIHNCVNAIIPHAPIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TKKYRERLENRLKELHNQDLDEQRLLTEVAIFAERCDIHEELVRLQSHLEQFRETLQIEE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]