Click here to switch to the map view.

The map label for this gene is ycsN [H]

Identifier: 30262047

GI number: 30262047

Start: 1899635

End: 1900537

Strand: Reverse

Name: ycsN [H]

Synonym: BA_2020

Alternate gene names: 30262047

Gene position: 1900537-1899635 (Counterclockwise)

Preceding gene: 30262049

Following gene: 30262044

Centisome position: 36.36

GC content: 38.32

Gene sequence:

>903_bases
ATGGAACGAGTTCAAATGGCCGAAACACTCGAATTTTCTCGTATTATTCAAGGTTTTTGGCGTTTAGCAGAATGGAATAT
GACGAAACAAGAATTACTTTCTTTCATTGAAGATTGTATGGATATGGGAATTACTACTTTTGATCATGCTGATATTTATG
GCGGTTATACGTGTGAAGGACTGTTCGGAGAGGCATTACAACTAAAGCCTTCTTTACGTGAAAACATGCAAATCATCACA
AAATGTGGAATCGCTCCCCCATCACCGAAATTTCCAGAGCGATATGTTGCTCACTACAACACTAGTGCAAAACATATTAT
TCAAAGTGCAGAAGCATCACTTAAAAATTTACATACAGATTATATTGACGTATTACTTATCCATCGTCCTGATCCTTTCA
TGGATCCAAATGAAGTGGCAGAAGCGTTTTTACGCTTAAAGCAAGAAGGAAAAGTTCGTCATTTCGGTGTATCTAACTTC
TTACCTTCTCAATTTAATATGTTAAGTTCATACTTAGATTTCCCGCTTATTACGAACCAAATTGAAGTATCTGCACTGCA
ACTTGAGCATTTTGAAAAAGGAACAATTGATTTATGTCAGGAGAAACGAATCAACCCAATGATTTGGTCACCTCTTGCTG
GCGGAGAAATCTTTACTGGTCAATCAGAACGCGCTGTACGTGTACGTGAAACCGTTCAAAAAGTCGCTACTGAACTAGGT
GTTACTAGCATCGATACTGTTATGTATGCATGGTTACTTGCACATCCAGCTAATATGATGCCGATCGTTGGCTCTGGTAA
ATTAGATCGTGTTAAAACGGCCGCTCTTGCTACAAAAGTTAACTTAGACCGTCAACAATGGTTTACAATTTTCGAAAGCT
CTAACGGACATCCTGTACCATAA

Upstream 100 bases:

>100_bases
CAAAACATATTTATTGTTTGTACGCCCCTCTAACTATATAATAACATGTAGTAAGAAAGCCTTTTCAAAATAATAATCAT
TCATCAAGGGGGTACTTATA

Downstream 100 bases:

>100_bases
TACACAAAAAGAAGAGCCGTTTCTTTACAGCTCTTCTTTTTCATATGTATTTCTCGTCATAGCAAAGACACACATATCTC
TTAATCCATTTCCATCTACT

Product: aldo/keto reductase family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MERVQMAETLEFSRIIQGFWRLAEWNMTKQELLSFIEDCMDMGITTFDHADIYGGYTCEGLFGEALQLKPSLRENMQIIT
KCGIAPPSPKFPERYVAHYNTSAKHIIQSAEASLKNLHTDYIDVLLIHRPDPFMDPNEVAEAFLRLKQEGKVRHFGVSNF
LPSQFNMLSSYLDFPLITNQIEVSALQLEHFEKGTIDLCQEKRINPMIWSPLAGGEIFTGQSERAVRVRETVQKVATELG
VTSIDTVMYAWLLAHPANMMPIVGSGKLDRVKTAALATKVNLDRQQWFTIFESSNGHPVP

Sequences:

>Translated_300_residues
MERVQMAETLEFSRIIQGFWRLAEWNMTKQELLSFIEDCMDMGITTFDHADIYGGYTCEGLFGEALQLKPSLRENMQIIT
KCGIAPPSPKFPERYVAHYNTSAKHIIQSAEASLKNLHTDYIDVLLIHRPDPFMDPNEVAEAFLRLKQEGKVRHFGVSNF
LPSQFNMLSSYLDFPLITNQIEVSALQLEHFEKGTIDLCQEKRINPMIWSPLAGGEIFTGQSERAVRVRETVQKVATELG
VTSIDTVMYAWLLAHPANMMPIVGSGKLDRVKTAALATKVNLDRQQWFTIFESSNGHPVP
>Mature_300_residues
MERVQMAETLEFSRIIQGFWRLAEWNMTKQELLSFIEDCMDMGITTFDHADIYGGYTCEGLFGEALQLKPSLRENMQIIT
KCGIAPPSPKFPERYVAHYNTSAKHIIQSAEASLKNLHTDYIDVLLIHRPDPFMDPNEVAEAFLRLKQEGKVRHFGVSNF
LPSQFNMLSSYLDFPLITNQIEVSALQLEHFEKGTIDLCQEKRINPMIWSPLAGGEIFTGQSERAVRVRETVQKVATELG
VTSIDTVMYAWLLAHPANMMPIVGSGKLDRVKTAALATKVNLDRQQWFTIFESSNGHPVP

Specific function: Unknown

COG id: COG4989

COG function: function code R; Predicted oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Homo sapiens, GI27436969, Length=196, Percent_Identity=29.5918367346939, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI4504825, Length=196, Percent_Identity=29.5918367346939, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI27436966, Length=191, Percent_Identity=26.7015706806283, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI27436964, Length=191, Percent_Identity=26.7015706806283, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI27436962, Length=191, Percent_Identity=26.7015706806283, Blast_Score=72, Evalue=9e-13,
Organism=Escherichia coli, GI48994888, Length=301, Percent_Identity=50.8305647840532, Blast_Score=317, Evalue=8e-88,
Organism=Escherichia coli, GI87081735, Length=324, Percent_Identity=25.3086419753086, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788081, Length=284, Percent_Identity=26.056338028169, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1788070, Length=316, Percent_Identity=27.2151898734177, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1789375, Length=228, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI87082198, Length=231, Percent_Identity=25.974025974026, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786400, Length=166, Percent_Identity=28.9156626506024, Blast_Score=62, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6325169, Length=313, Percent_Identity=27.7955271565495, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34040; Mature: 34040

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVQMAETLEFSRIIQGFWRLAEWNMTKQELLSFIEDCMDMGITTFDHADIYGGYTCEG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC
LFGEALQLKPSLRENMQIITKCGIAPPSPKFPERYVAHYNTSAKHIIQSAEASLKNLHTD
HHCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YIDVLLIHRPDPFMDPNEVAEAFLRLKQEGKVRHFGVSNFLPSQFNMLSSYLDFPLITNQ
HEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCHHCCHHHHHHHHHHHCCCCCCCH
IEVSALQLEHFEKGTIDLCQEKRINPMIWSPLAGGEIFTGQSERAVRVRETVQKVATELG
HHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHC
VTSIDTVMYAWLLAHPANMMPIVGSGKLDRVKTAALATKVNLDRQQWFTIFESSNGHPVP
CHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHEEEEECCCCCCCC
>Mature Secondary Structure
MERVQMAETLEFSRIIQGFWRLAEWNMTKQELLSFIEDCMDMGITTFDHADIYGGYTCEG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC
LFGEALQLKPSLRENMQIITKCGIAPPSPKFPERYVAHYNTSAKHIIQSAEASLKNLHTD
HHCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YIDVLLIHRPDPFMDPNEVAEAFLRLKQEGKVRHFGVSNFLPSQFNMLSSYLDFPLITNQ
HEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCHHCCHHHHHHHHHHHCCCCCCCH
IEVSALQLEHFEKGTIDLCQEKRINPMIWSPLAGGEIFTGQSERAVRVRETVQKVATELG
HHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHC
VTSIDTVMYAWLLAHPANMMPIVGSGKLDRVKTAALATKVNLDRQQWFTIFESSNGHPVP
CHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]