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The map label for this gene is yjjU

Identifier: 30065615

GI number: 30065615

Start: 4571423

End: 4572496

Strand: Direct

Name: yjjU

Synonym: S4680

Alternate gene names: 30065615

Gene position: 4571423-4572496 (Clockwise)

Preceding gene: 30065614

Following gene: 30065616

Centisome position: 99.39

GC content: 54.19

Gene sequence:

>1074_bases
GTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGTTCCAGCCTGGACGAATAGCTCT
GGTGTGCGAAGGCGGCGGACAGCGTGGAATTTTCACGGCTGGCGTGCTGGATGAGTTTATGCGCGCGCAGTTTAATCCTT
TCGATCTTTATCTCGGCACATCTGCCGGGGCGCAGAACCTCTCGGCGTTTATCTGCAATCAGCCCGGTTACGCGCGCAAA
GTCATCATGCGCTATACCACAAAACGCGAATTTTTCGATCCATTGCGCTTTGTCCGTGGAGGAAATCTTATCGATCTCGA
CTGGCTGGTGGAGGCCACCGCAAGCCAGATGCCGTTGCAAATGGATACCGCCGCGCGGTTGTTTGACAGCGGCAAATCGT
TTTATATGTGCGCCTGTCGTCAGGATGACTACGCGCCGAATTACTTTTTACCAACCAAACAAAACTGGCTGGATGTGATT
CGCGCCTCCAGTGCGATACCTGGCTTTTATCGTAGCGGAGTGTCGCTGGAAGGCATTAACTACCTGGATGGCGGGATCAG
TGATGCGATTCCGGTTAAAGAGGCGGCAAGGCAGGGCGCTAAAACGTTGGTCGTCATCCGCACTGTGCCGTCACAAATGT
ACTACACGCCGCAGTGGTTCAAACGCATGGAACGCTGGCTGGGTGACAGTAGCCTGCAGCCGCTGGTCAATCTGGTGCAG
CATCATGAAACCAGCTATCGTGACATTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATCCGAAATTTATCC
GCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCG
GTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACG
CCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAA
CGACCCGACATTTAACAATGAGGATCTGGCTTGA

Upstream 100 bases:

>100_bases
TTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCTTTCTTTCACA
ACAAAAACAGGAAGGCAGAA

Downstream 100 bases:

>100_bases
TTTGCCGTTTTATCGACACTCACTGCCATTTTGATTTCCCGCCTTTTATTGGCGATGAAGAGGCCAGCCTGCAACGCGCG
GCACAAGCGGGCGTAGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARK
VIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVI
RASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQ
HHETSYRDIQQFIEKPPGKLRISEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVT
PESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA

Sequences:

>Translated_357_residues
MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARK
VIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVI
RASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQ
HHETSYRDIQQFIEKPPGKLRISEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVT
PESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA
>Mature_356_residues
GQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKV
IMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIR
ASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQH
HETSYRDIQQFIEKPPGKLRISEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTP
ESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=357, Percent_Identity=99.7198879551821, Blast_Score=734, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 39772; Mature: 39641

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGT
CCCCCCEEECCCCCCEECCCCCCCEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEEEC
SAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQ
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCH
MDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGIN
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCC
YLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQ
CCCCCCCCCCCHHHHHHCCCCEEEEEEECCCHHEECHHHHHHHHHHHCCCCHHHHHHHHH
HHETSYRDIQQFIEKPPGKLRISEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLAT
HCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA
HHHHHHCCCCHHHCCEEEECCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGT
CCCCCEEECCCCCCEECCCCCCCEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEEEC
SAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQ
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCH
MDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGIN
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCC
YLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQ
CCCCCCCCCCCHHHHHHCCCCEEEEEEECCCHHEECHHHHHHHHHHHCCCCHHHHHHHHH
HHETSYRDIQQFIEKPPGKLRISEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLAT
HCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA
HHHHHHCCCCHHHCCEEEECCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]