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The map label for this gene is yjfM

Identifier: 30065555

GI number: 30065555

Start: 4508048

End: 4508686

Strand: Direct

Name: yjfM

Synonym: S4607

Alternate gene names: 30065555

Gene position: 4508048-4508686 (Clockwise)

Preceding gene: 30065554

Following gene: 30065556

Centisome position: 98.01

GC content: 49.61

Gene sequence:

>639_bases
ATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATCAGTCGCATTGGTAGACCGAATAATCC
TTTTGAACCGCGTCGCAATCGCTACGCACAAAAATACTTAACGTTGGCGCTAATGGGCGGTGCCGCTTTTTTCGTATTGA
AAGGTTGTAGCGATAGTAGCGATGTCGATAACGACGGCGACGGAACATTTTACGCGACAGTGCAGGATTGTATTGATGAC
GGTAATAATGCCGACATTTGCGCGCGTGGCTGGAACAACGCCAAAGCGGCATTTTATGCCGATGTTCCAAAGAATATGAC
TCAGCAGAACTGTCAGTCTAAGTACGAAAATTGCTACTACGACAATGTTGAACAGAGTTGGATCCCGGTCGTTTCTGGAT
TTTTGTTAAGCCGGGTTATTCGTAAAGATCGCGATGAGCCGTTCGTCTATAACAGCGGCGGATCCTCATTTGCTTCCCGC
CCCGTCTGGCGCAACACTTCCGGTGATTACTCCTGGCGCTTCGGTTCTGGCAAAAAAGAGTCTTACTCTTCAGGCGGCTT
TACCACCAGAAAAGCGTCGACCGTTTCGCGCGGCGGCTATGGTCGTTCTTCCAGCGCCCGTGGGCATTGGGGAGGCTAA

Upstream 100 bases:

>100_bases
AATTATTAATCACAATACCGCAGCAGGAATGTTTATGGGAACCGCCGCGCTGGCTGGCGGTATTTTTAACGCAGCTTGTA
TGACATGGTAATGGACGATC

Downstream 100 bases:

>100_bases
TCATGCTGAGACACAACGTTCCTGTGCGGCGGGATCTGGACCAGATCGCCGCTAACAACGGTTTCGACTTTCATATCATC
GACAATGAAATCTATTGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLALMGGAAFFVLKGCSDSSDVDNDGDGTFYATVQDCIDD
GNNADICARGWNNAKAAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASR
PVWRNTSGDYSWRFGSGKKESYSSGGFTTRKASTVSRGGYGRSSSARGHWGG

Sequences:

>Translated_212_residues
MARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLALMGGAAFFVLKGCSDSSDVDNDGDGTFYATVQDCIDD
GNNADICARGWNNAKAAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASR
PVWRNTSGDYSWRFGSGKKESYSSGGFTTRKASTVSRGGYGRSSSARGHWGG
>Mature_211_residues
ARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLALMGGAAFFVLKGCSDSSDVDNDGDGTFYATVQDCIDDG
NNADICARGWNNAKAAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRP
VWRNTSGDYSWRFGSGKKESYSSGGFTTRKASTVSRGGYGRSSSARGHWGG

Specific function: Unknown

COG id: COG5463

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790628, Length=212, Percent_Identity=97.6415094339623, Blast_Score=426, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009576 [H]

Pfam domain/function: PF06693 DUF1190 [H]

EC number: NA

Molecular weight: Translated: 23490; Mature: 23359

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLALMGGAAFFVLKGCSDSS
CCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC
DVDNDGDGTFYATVQDCIDDGNNADICARGWNNAKAAFYADVPKNMTQQNCQSKYENCYY
CCCCCCCCEEEEEHHHHHCCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
DNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWRNTSGDYSWRFGSGKKE
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHCCCCCCCCCCCEEEEECCCCCC
SYSSGGFTTRKASTVSRGGYGRSSSARGHWGG
CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLALMGGAAFFVLKGCSDSS
CCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC
DVDNDGDGTFYATVQDCIDDGNNADICARGWNNAKAAFYADVPKNMTQQNCQSKYENCYY
CCCCCCCCEEEEEHHHHHCCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
DNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWRNTSGDYSWRFGSGKKE
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHCCCCCCCCCCCEEEEECCCCCC
SYSSGGFTTRKASTVSRGGYGRSSSARGHWGG
CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]