Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yjeI
Identifier: 30065519
GI number: 30065519
Start: 4468589
End: 4468975
Strand: Direct
Name: yjeI
Synonym: S4565
Alternate gene names: 30065519
Gene position: 4468589-4468975 (Clockwise)
Preceding gene: 30065518
Following gene: 30065521
Centisome position: 97.16
GC content: 55.3
Gene sequence:
>387_bases GTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGAT GGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCATTGTGGACGAGCAGCCAGGCGCAGAGT GCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAGGGCGGTTCTATGCGC GGCGCAGCAAACGATCTGCGCAACCAGGCGGCTGCAATGGGCGGTAACGTGATTTATGGCATCAGCAGCCCGTCGCAGGG AATGTTGTCCAGTTTTGTCCCGACGGATAGCCAGATTATCGGTCAGGTTTATAAGTGCCCGAACTGA
Upstream 100 bases:
>100_bases CCTGCACTTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGA TTCAGACACGGATGACGCGA
Downstream 100 bases:
>100_bases TGTGATCCAGAGGCTGGGTGACAAACGTATTATTGCCTGATGCGCTTCGCTTATCAGGCCTACAGCAGGCATTGCAACTG ATTGAATGCTTGAGAATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MASSSLIMGNNMHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQLIGTATGKQSNWLSGQHGEEGGSMR GAANDLRNQAAAMGGNVIYGISSPSQGMLSSFVPTDSQIIGQVYKCPN
Sequences:
>Translated_128_residues MASSSLIMGNNMHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQLIGTATGKQSNWLSGQHGEEGGSMR GAANDLRNQAAAMGGNVIYGISSPSQGMLSSFVPTDSQIIGQVYKCPN >Mature_127_residues ASSSLIMGNNMHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQLIGTATGKQSNWLSGQHGEEGGSMRG AANDLRNQAAAMGGNVIYGISSPSQGMLSSFVPTDSQIIGQVYKCPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082377, Length=117, Percent_Identity=100, Blast_Score=238, Evalue=7e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13065; Mature: 12934
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSSLIMGNNMHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQLIGTA CCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEECC TGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFVPTDSQII CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCHHHH GQVYKCPN HHHHCCCC >Mature Secondary Structure ASSSLIMGNNMHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQLIGTA CCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEECC TGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFVPTDSQII CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCHHHH GQVYKCPN HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]