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The map label for this gene is ytfJ

Identifier: 30065492

GI number: 30065492

Start: 4440912

End: 4441466

Strand: Direct

Name: ytfJ

Synonym: S4535

Alternate gene names: 30065492

Gene position: 4440912-4441466 (Clockwise)

Preceding gene: 30065490

Following gene: 30065494

Centisome position: 96.56

GC content: 52.43

Gene sequence:

>555_bases
ATGACCCTACGCAAGATTCTGGCACTCACCTGCCTGCTGTTGCCGATGATGGCTTCCACACATCAGTTCGAAATCGGTCA
GCGAGTGCCGCCGATTGGCATTACCGATCGGGGCGAGTTGGTGCTTGATAAAGATCAGTTTAGCTACAAAACCTGGAACA
GCGCGCAGTTAGTGGGAAAAGTGCGAGTACTGCAACATATTGCTGGTCGCACCTCTGCAAAAGAGAAAAACGCGACGCTG
ATTGAAGCGATTAAATCAGCGAAGTTACCGCACGATCGTTACCAGACCACCACCATTGTTAACACCGACGACGCGATTCC
GGGTTCCGGCATGTTTGTGCGCAGCAGTCTGGAGAGTAATAAAAAGCTTTATCCCTGGTCGCAGTTTATTGTCGATAGCA
ATGGCGTCGCGCGCGGTGCCTGGCAGCTGGATGAAGAAAGTTCCGCTGTAGTGGTGCTGGATAAAGACGGTCGCGTGCAA
TGGGCCAAAGACGGGGCGCTCACACCGGAAGAGGTGCAGCAAGTGATGGACCTGCTGCAAAAGTTGCTCAAATAA

Upstream 100 bases:

>100_bases
AACTGGCATCACACTTGCGGGAAATTCGATAAATAGCACATATGATTAAAACTCAGACCCAAGTGGTCGGATCACCTGCA
TATCATAAGAAGGAAACACC

Downstream 100 bases:

>100_bases
TGGCAATAACATAAATTCTGCAAAAATAATTTTCCCCTATCGTTATCTATGGGATAGGGGAATTAAGTCTCTGAGTTCTT
ACACCGAACTAATACTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MTLRKILALTCLLLPMMASTHQFEIGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATL
IEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVARGAWQLDEESSAVVVLDKDGRVQ
WAKDGALTPEEVQQVMDLLQKLLK

Sequences:

>Translated_184_residues
MTLRKILALTCLLLPMMASTHQFEIGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATL
IEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVARGAWQLDEESSAVVVLDKDGRVQ
WAKDGALTPEEVQQVMDLLQKLLK
>Mature_183_residues
TLRKILALTCLLLPMMASTHQFEIGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLI
EAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVARGAWQLDEESSAVVVLDKDGRVQW
AKDGALTPEEVQQVMDLLQKLLK

Specific function: Unknown

COG id: COG3054

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0045 [H]

Homologues:

Organism=Escherichia coli, GI1790662, Length=184, Percent_Identity=98.3695652173913, Blast_Score=372, Evalue=1e-105,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006513 [H]

Pfam domain/function: PF09695 YtfJ_HI0045 [H]

EC number: NA

Molecular weight: Translated: 20506; Mature: 20375

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRKILALTCLLLPMMASTHQFEIGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGK
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHH
VRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESN
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCC
KKLYPWSQFIVDSNGVARGAWQLDEESSAVVVLDKDGRVQWAKDGALTPEEVQQVMDLLQ
CCCCCHHHEEECCCCCCCCCEEECCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHH
KLLK
HHHC
>Mature Secondary Structure 
TLRKILALTCLLLPMMASTHQFEIGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGK
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHH
VRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESN
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCC
KKLYPWSQFIVDSNGVARGAWQLDEESSAVVVLDKDGRVQWAKDGALTPEEVQQVMDLLQ
CCCCCHHHEEECCCCCCCCCEEECCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHH
KLLK
HHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7764507; 9298646; 10493123 [H]