Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is yjfA

Identifier: 30065485

GI number: 30065485

Start: 4431952

End: 4432215

Strand: Direct

Name: yjfA

Synonym: S4528

Alternate gene names: 30065485

Gene position: 4431952-4432215 (Clockwise)

Preceding gene: 30065484

Following gene: 30065489

Centisome position: 96.36

GC content: 51.52

Gene sequence:

>264_bases
ATTATTACTTATCCCTGTCTAACCAGTCGCCGCTTTCAATTAGCTTTAATCCATCGACGGGTCGTTGATAAACGTACATC
CATGCACTCCCATACGGCGTCTGAATCAACTGGCGCGCGTATTCACCGCCCCTGGTGCGCAAGGCATCAAGTTCGGCCAG
CGTGGCGTTGTCAATACGATAAACTTCACCGTGTACCGTTCCGTTCCCCGGAACTGCGCCTGGATAGTGGCCCAGGCTAT
ACAACTGGTAGTTATCGATACTGA

Upstream 100 bases:

>100_bases
GAAAGCGGCTCGGAGAGAAAAGCAAAAGATGGAAAAGTTACAAAAAAAAATCGCGAGATACATCGCATAAAACAACGCCA
CCCGAAGGAGGCGTGCTTTT

Downstream 100 bases:

>100_bases
AATCGCCCAGTAACTGGGCATTGGTCATCCAGTGACTGTTGCCTTGTTTGTGGCGTAAACTGCCGTAGACAAATATTCGC
ATTGCTAAAACTCGAACTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MITYPCLTSRRFQLALIHRRVVDKRTSMHSHTASESTGARIHRPWCARHQVRPAWRCQYDKLHRVPFRSPELRLDSGPGY
TTGSYRY

Sequences:

>Translated_87_residues
MITYPCLTSRRFQLALIHRRVVDKRTSMHSHTASESTGARIHRPWCARHQVRPAWRCQYDKLHRVPFRSPELRLDSGPGY
TTGSYRY
>Mature_87_residues
MITYPCLTSRRFQLALIHRRVVDKRTSMHSHTASESTGARIHRPWCARHQVRPAWRCQYDKLHRVPFRSPELRLDSGPGY
TTGSYRY

Specific function: Could be a multicopy suppressor of the ileR regulatory mutation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10312; Mature: 10312

Theoretical pI: Translated: 11.29; Mature: 11.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITYPCLTSRRFQLALIHRRVVDKRTSMHSHTASESTGARIHRPWCARHQVRPAWRCQYD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
KLHRVPFRSPELRLDSGPGYTTGSYRY
HHCCCCCCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MITYPCLTSRRFQLALIHRRVVDKRTSMHSHTASESTGARIHRPWCARHQVRPAWRCQYD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
KLHRVPFRSPELRLDSGPGYTTGSYRY
HHCCCCCCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3525538; 7610040; 9278503 [H]