Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yjfA
Identifier: 30065485
GI number: 30065485
Start: 4431952
End: 4432215
Strand: Direct
Name: yjfA
Synonym: S4528
Alternate gene names: 30065485
Gene position: 4431952-4432215 (Clockwise)
Preceding gene: 30065484
Following gene: 30065489
Centisome position: 96.36
GC content: 51.52
Gene sequence:
>264_bases ATTATTACTTATCCCTGTCTAACCAGTCGCCGCTTTCAATTAGCTTTAATCCATCGACGGGTCGTTGATAAACGTACATC CATGCACTCCCATACGGCGTCTGAATCAACTGGCGCGCGTATTCACCGCCCCTGGTGCGCAAGGCATCAAGTTCGGCCAG CGTGGCGTTGTCAATACGATAAACTTCACCGTGTACCGTTCCGTTCCCCGGAACTGCGCCTGGATAGTGGCCCAGGCTAT ACAACTGGTAGTTATCGATACTGA
Upstream 100 bases:
>100_bases GAAAGCGGCTCGGAGAGAAAAGCAAAAGATGGAAAAGTTACAAAAAAAAATCGCGAGATACATCGCATAAAACAACGCCA CCCGAAGGAGGCGTGCTTTT
Downstream 100 bases:
>100_bases AATCGCCCAGTAACTGGGCATTGGTCATCCAGTGACTGTTGCCTTGTTTGTGGCGTAAACTGCCGTAGACAAATATTCGC ATTGCTAAAACTCGAACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MITYPCLTSRRFQLALIHRRVVDKRTSMHSHTASESTGARIHRPWCARHQVRPAWRCQYDKLHRVPFRSPELRLDSGPGY TTGSYRY
Sequences:
>Translated_87_residues MITYPCLTSRRFQLALIHRRVVDKRTSMHSHTASESTGARIHRPWCARHQVRPAWRCQYDKLHRVPFRSPELRLDSGPGY TTGSYRY >Mature_87_residues MITYPCLTSRRFQLALIHRRVVDKRTSMHSHTASESTGARIHRPWCARHQVRPAWRCQYDKLHRVPFRSPELRLDSGPGY TTGSYRY
Specific function: Could be a multicopy suppressor of the ileR regulatory mutation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10312; Mature: 10312
Theoretical pI: Translated: 11.29; Mature: 11.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITYPCLTSRRFQLALIHRRVVDKRTSMHSHTASESTGARIHRPWCARHQVRPAWRCQYD CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC KLHRVPFRSPELRLDSGPGYTTGSYRY HHCCCCCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure MITYPCLTSRRFQLALIHRRVVDKRTSMHSHTASESTGARIHRPWCARHQVRPAWRCQYD CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC KLHRVPFRSPELRLDSGPGYTTGSYRY HHCCCCCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3525538; 7610040; 9278503 [H]