| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yheA
Identifier: 30065376
GI number: 30065376
Start: 4333465
End: 4333659
Strand: Direct
Name: yheA
Synonym: S4406
Alternate gene names: 30065376
Gene position: 4333465-4333659 (Clockwise)
Preceding gene: 30065375
Following gene: 30065377
Centisome position: 94.22
GC content: 45.13
Gene sequence:
>195_bases ATGTACGTTTGTTTGTGTAATGGTGTAAGTGACAAAAAAATTCGCCAGGCAGTCCGTCAGTTTCATCCGCAATCTTTCCA ACAATTGCGTAAGTTTATTCCTGTGGGAAATCAATGCGGTAAGTGCATTCGCGCCGCGCGCGAAGTGATGCAGGACGAGT TGATGCAGATGCCAGAATTTAAAGAGATTGCCTGA
Upstream 100 bases:
>100_bases CGTAATTTTGCTCGCTGAACTATGGCGCAAATAAAACTGTGCTATTGTAATCATAACCATTCTCATTTACACTTTGTGCA GAATTTGAACGGGAGCAATC
Downstream 100 bases:
>100_bases AGCCCACGCTTATTTTTTGACATCCTGCTAGCCCCATCTACGCTCTAATAGTGGAAGCGGAGGGACTATAAAATGAAAGG TGATGTTAAAATCATAAATT
Product: bacterioferritin-associated ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MYVCLCNGVSDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIRAAREVMQDELMQMPEFKEIA
Sequences:
>Translated_64_residues MYVCLCNGVSDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIRAAREVMQDELMQMPEFKEIA >Mature_64_residues MYVCLCNGVSDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIRAAREVMQDELMQMPEFKEIA
Specific function: Seems to associate with BFR; could be a general redox and/or regulatory component participating in the iron storage mobilization functions of BFR. Could participate in the release or the delivery of iron from/to bacterioferritin (or other iron complexes)
COG id: COG2906
COG function: function code P; Bacterioferritin-associated ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789735, Length=64, Percent_Identity=87.5, Blast_Score=122, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007419 [H]
Pfam domain/function: PF04324 Fer2_BFD [H]
EC number: NA
Molecular weight: Translated: 7475; Mature: 7475
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 12.5 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 12.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVCLCNGVSDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIRAAREVMQDELMQMPEF CEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH KEIA HCCC >Mature Secondary Structure MYVCLCNGVSDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIRAAREVMQDELMQMPEF CEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH KEIA HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]