| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is fusA
Identifier: 30065374
GI number: 30065374
Start: 4330060
End: 4332027
Strand: Direct
Name: fusA
Synonym: S4404
Alternate gene names: 30065374
Gene position: 4330060-4332027 (Clockwise)
Preceding gene: 30065373
Following gene: 30065375
Centisome position: 94.14
GC content: 50.86
Gene sequence:
>1968_bases ATGGACTGGATGGAGCAGGAGCAGGAACGTGGTATTACCATCACTTCCGCTGCGACTACTGCATTCTGGTCTGGTATGGC TAAGCAGTATGAGCCGCATCGCATCAACATCATCGACACCCCGGGGCACGTTGACTTCACAATCGAAGTAGAACGTTCCA TGCGTGTTCTCGATGGTGCGGTAATGGTTTACTGCGCAGTTGGTGGTGTTCAGCCGCAGTCTGAAACCGTATGGCGTCAG GCAAACAAATATAAAGTTCCGCGCATTGCGTTCGTTAACAAAATGGACCGCGTGGGTGCGAACTTCCTGAAAGTTGTTAA CCAGATCAAAACCCGTCTGGGCGCGAACCCGGTTCCGCTGCAGCTGGCGATTGGTGCTGAAGAACATTTCACCGGTGTTG TTGACCTGGTGAAAATGAAAGCTATCAACTGGAATGACGCTGACCAGGGCGTAACCTTCGAATACGAAGATATCCCGGCA GACATGGTTGAACTGGCTAACGAATGGCACCAGAACCTGATCGAATCCGCAGCTGAAGCTTCTGAAGAGCTGATGGAAAA ATACCTGGGTGGTGAAGAACTGACTGAAGCAGAAATCAAAGGTGCTCTGCGTCAGCGCGTTCTGAACAACGAAATCATCC TGGTAACCTGTGGTTCTGCGTTCAAGAACAAAGGTGTTCAGGCGATGCTGGATGCGGTAATTGATTACCTGCCATCCCCG GTTGACGTACCTGCGATCAACGGTATCCTGGACGACGGTAAAGACACTCCGGCTGAACGTCACGCAAGTGATGACGAGCC GTTCTCTGCACTGGCGTTCAAAATCGCTACCGACCCGTTTGTTGGTAACCTGACCTTCTTCCGTGTTTACTCCGGTGTGG TTAACTCTGGTGATACCGTACTGAACTCCGTGAAAGCTGCACGTGAGCGTTTCGGTCGTATCGTTCAGATGCACGCTAAC AAACGTGAAGAGATCAAAGAAGTTCGCGCGGGCGACATCGCTGCTGCTATCGGCCTGAAAGACGTAACCACTGGTGACAC CCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGA AAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACT GACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGA ATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAG GTAAACACGCGAAACAGTCTGGTGGTCGTGGTCAGTATGGTCATGTTGTTATCGACATGTACCCGCTGGAGCCGGGTTCA AACCCGAAAGGCTACGAGTTCATCAACGACATTAAAGGTGGTGTAATCCCTGGCGAATACATCCCGGCCGTTGATAAAGG TATCCAGGAACAGCTGAAAGCAGGTCCGCTGGCAGGCTACCCGGTAGTAGACATGGGTATTCGTCTGCACTTCGGTTCTT ACCATGACGTTGACTCCTCTGAACTGGCGTTTAAACTGGCTGCTTCTATCGCCTTTAAAGAAGGCTTTAAGAAAGCGAAA CCAGTTCTGCTTGAGCCGATCATGAAGGTTGAAGTAGAAACTCCGGAAGAGAACACCGGTGACGTTATCGGTGACTTGAG CCGTCGTCGTGGTATGCTCAAAGGTCAGGAATCTGAAGTTACTGGCGTTAAGATCCACGCTGAAGTACCGCTGTCTGAAA TGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAA GCGCCGAGTAACGTTGCTCAGGCCGTAATTGAAGCCCGTGGTAAATAA
Upstream 100 bases:
>100_bases TGCGCACATCGACGCCGGTAAAACCACTACTACCGAACGTATTCTGTTCTACACCGGTGTAAACCATAAAATCGGTGAAG TTCATGACGGCGCTGCAACC
Downstream 100 bases:
>100_bases GCCTAAGGGTTAATACCAAAGTCCCGTGCTCTCTCCTGAAGGGGAGAGCACTATAGTAAGGAATATAGCCGTGTCTAAAG AAAAATTTGAACGTACAAAA
Product: elongation factor EF-2
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 655; Mature: 655
Protein sequence:
>655_residues MDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQ ANKYKVPRIAFVNKMDRVGANFLKVVNQIKTRLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPA DMVELANEWHQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSP VDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHAN KREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWT DEESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGS NPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAK PVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDE APSNVAQAVIEARGK
Sequences:
>Translated_655_residues MDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQ ANKYKVPRIAFVNKMDRVGANFLKVVNQIKTRLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPA DMVELANEWHQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSP VDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHAN KREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWT DEESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGS NPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAK PVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDE APSNVAQAVIEARGK >Mature_655_residues MDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQ ANKYKVPRIAFVNKMDRVGANFLKVVNQIKTRLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPA DMVELANEWHQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSP VDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHAN KREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWT DEESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGS NPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAK PVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDE APSNVAQAVIEARGK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=665, Percent_Identity=43.4586466165414, Blast_Score=523, Evalue=1e-148, Organism=Homo sapiens, GI19923640, Length=672, Percent_Identity=36.3095238095238, Blast_Score=394, Evalue=1e-109, Organism=Homo sapiens, GI25306287, Length=672, Percent_Identity=34.5238095238095, Blast_Score=357, Evalue=3e-98, Organism=Homo sapiens, GI25306283, Length=411, Percent_Identity=37.712895377129, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI4503483, Length=513, Percent_Identity=26.3157894736842, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI94966754, Length=98, Percent_Identity=42.8571428571429, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI157426893, Length=110, Percent_Identity=37.2727272727273, Blast_Score=77, Evalue=8e-14, Organism=Escherichia coli, GI1789738, Length=655, Percent_Identity=99.8473282442748, Blast_Score=1346, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=445, Percent_Identity=25.1685393258427, Blast_Score=128, Evalue=1e-30, Organism=Escherichia coli, GI48994988, Length=302, Percent_Identity=27.8145695364238, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1788922, Length=116, Percent_Identity=35.3448275862069, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17533571, Length=662, Percent_Identity=41.8429003021148, Blast_Score=479, Evalue=1e-135, Organism=Caenorhabditis elegans, GI17556745, Length=667, Percent_Identity=28.1859070464768, Blast_Score=250, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17506493, Length=426, Percent_Identity=26.9953051643192, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17557151, Length=117, Percent_Identity=38.4615384615385, Blast_Score=75, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=651, Percent_Identity=41.7818740399386, Blast_Score=507, Evalue=1e-144, Organism=Saccharomyces cerevisiae, GI6322359, Length=753, Percent_Identity=28.8180610889774, Blast_Score=310, Evalue=4e-85, Organism=Saccharomyces cerevisiae, GI6324707, Length=480, Percent_Identity=25.625, Blast_Score=101, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6320593, Length=480, Percent_Identity=25.625, Blast_Score=101, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6324166, Length=133, Percent_Identity=35.3383458646617, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24582462, Length=657, Percent_Identity=43.6834094368341, Blast_Score=536, Evalue=1e-152, Organism=Drosophila melanogaster, GI221458488, Length=700, Percent_Identity=30.4285714285714, Blast_Score=306, Evalue=2e-83, Organism=Drosophila melanogaster, GI24585711, Length=771, Percent_Identity=27.1076523994812, Blast_Score=157, Evalue=3e-38, Organism=Drosophila melanogaster, GI24585713, Length=771, Percent_Identity=27.1076523994812, Blast_Score=157, Evalue=3e-38, Organism=Drosophila melanogaster, GI24585709, Length=771, Percent_Identity=27.1076523994812, Blast_Score=156, Evalue=4e-38, Organism=Drosophila melanogaster, GI78706572, Length=142, Percent_Identity=33.0985915492958, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI28574573, Length=101, Percent_Identity=38.6138613861386, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 72241; Mature: 72241
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGA CCCHHHHHHCCEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECHHHHHHHHH VMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRVGANFLKVVNQIKTRLGANPVPL HEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE QLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEA EEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH SEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSP HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCC VDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTV CCCCHHCCCCCCCCCCCHHHCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHHCCCHHH LNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERM HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCEEEHHH EFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDII CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCHHHHHHH VDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGS HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEEEECCCCC NPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYHDVDSS CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCEEEEECCCCCCCCH ELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEV HHHHHHHHHHHHHHHHHHCCCHHHCCHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCC TGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDEAPSNVAQAVIEARGK CEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGA CCCHHHHHHCCEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECHHHHHHHHH VMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRVGANFLKVVNQIKTRLGANPVPL HEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE QLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEA EEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH SEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSP HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCC VDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTV CCCCHHCCCCCCCCCCCHHHCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHHCCCHHH LNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERM HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCEEEHHH EFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDII CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCHHHHHHH VDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGS HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEEEECCCCC NPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYHDVDSS CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCEEEEECCCCCCCCH ELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEV HHHHHHHHHHHHHHHHHHCCCHHHCCHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCC TGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDEAPSNVAQAVIEARGK CEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA