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The map label for this gene is yiaG

Identifier: 30065166

GI number: 30065166

Start: 4084550

End: 4084675

Strand: Reverse

Name: yiaG

Synonym: S4180

Alternate gene names: 30065166

Gene position: 4084675-4084550 (Counterclockwise)

Preceding gene: 30065168

Following gene: 30065165

Centisome position: 88.81

GC content: 40.48

Gene sequence:

>126_bases
ATGGAATATAAAGATCCAATGCATGAGCTGTTGAGCAGCCTGGAACAGATTGTTTTTAAAGATGAAACGCAGAAAATTAC
CCTGACGCACAGAACAACGTCCTGTACCGAAATTGAGCAGTTATGA

Upstream 100 bases:

>100_bases
GCATGCCCTGACTTCACCCCGCTGTGTCTGCTTTTCCCGACTATTCTTAATGAGCTTCGATGCAATTCACGATCCCGCAG
TGTGATTTGAGGAGTTTTCA

Downstream 100 bases:

>100_bases
AAAGGGACAGGATTAAAAATCGATGATTTCGCCCGGGTTTTGGGCGTATCAGTCGCCATGGTAAAGGAATGGGAATCCAG
ACGCGTGAAGCCTTCAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQL

Sequences:

>Translated_41_residues
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQL
>Mature_41_residues
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQL

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

Organism=Escherichia coli, GI1789978, Length=41, Percent_Identity=100, Blast_Score=86, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIAG_ECO57 (P0A9V7)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   D86030
- PIR:   H91183
- RefSeq:   NP_290140.1
- RefSeq:   NP_312467.1
- ProteinModelPortal:   P0A9V7
- SMR:   P0A9V7
- EnsemblBacteria:   EBESCT00000026742
- EnsemblBacteria:   EBESCT00000059564
- GeneID:   915652
- GeneID:   961057
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4980
- KEGG:   ecs:ECs4440
- GeneTree:   EBGT00050000009877
- HOGENOM:   HBG665571
- OMA:   QEWESRR
- ProtClustDB:   PRK10072
- BioCyc:   ECOL83334:ECS4440-MONOMER
- GO:   GO:0006350
- InterPro:   IPR001387
- SMART:   SM00530

Pfam domain/function: PF01381 HTH_3

EC number: NA

Molecular weight: Translated: 4868; Mature: 4868

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQL
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCC
>Mature Secondary Structure
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQL
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796