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The map label for this gene is yibN

Identifier: 30065113

GI number: 30065113

Start: 4017606

End: 4018037

Strand: Direct

Name: yibN

Synonym: S4118

Alternate gene names: 30065113

Gene position: 4017606-4018037 (Clockwise)

Preceding gene: 30065109

Following gene: 30065114

Centisome position: 87.35

GC content: 50.0

Gene sequence:

>432_bases
ATGCAAGAAATTATGCAATTTGTTGGCCGTCATCCCATACTGAGTATCGCCTGGATCGCGTTACTGGTGGCGGTTCTTGT
GACTACGTTTAAGAGCCTGACCTCGAAAGTGAAGGTGATTACTCGTGGTGAAGCTACGCGTCTGATCAACAAAGAAGACG
CTGTGGTTGTGGATTTACGTCAGCGTGATGACTTCCGTAAAGGCCATATCGCAGGTTCTATCAATCTGTTGCCGAGCGAA
ATCAAAGCCAACAATGTTGGTGAGCTTGAGAAGCACAAAGACAAATCGGTTATCGTGGTAGACGGTTCTGGCATGCAGTG
CCAGGAGCCTGCAAACGCGCTGACGAAAGCTGGTTTTGCGCAAGTATTCGTGCTGAAAGAGGGCGTTGCTGGCTGGGCTG
GCGAAAACTTGCCTCTGGTGCGCGGCAAATAA

Upstream 100 bases:

>100_bases
AATTGCATTCCAGTTAACGCGCTGGCTGTATTTGCCGCACCGCGCAGGTATACTCCTTTCCTGGTTTTTTTAATCACTAC
GTCGGGAGTTGTTACCCCCC

Downstream 100 bases:

>100_bases
TTTACCTGTCGTCTTTCATGATGCAGGCCGTTAGCTGCAATTAGGCCCCCAGCGACTTATTGTTATAAGCTTCTGGGGAC
ACTCCATTTTGCAGCCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSE
IKANNVGELEKHKDKSVIVVDGSGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK

Sequences:

>Translated_143_residues
MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSE
IKANNVGELEKHKDKSVIVVDGSGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK
>Mature_143_residues
MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSE
IKANNVGELEKHKDKSVIVVDGSGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=143, Percent_Identity=99.3006993006993, Blast_Score=287, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 15586; Mature: 15586

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLR
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCEEEEEEC
QRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKSVIVVDGSGMQCQEPANALTKAGFA
CCCCCCCCCCCEEECCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCHHHHHHHCCHH
QVFVLKEGVAGWAGENLPLVRGK
HEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLR
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCEEEEEEC
QRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKSVIVVDGSGMQCQEPANALTKAGFA
CCCCCCCCCCCEEECCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCHHHHHHHCCHH
QVFVLKEGVAGWAGENLPLVRGK
HEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]