Definition | Shigella flexneri 2a str. 2457T, complete genome. |
---|---|
Accession | NC_004741 |
Length | 4,599,354 |
Click here to switch to the map view.
The map label for this gene is iucB
Identifier: 30065051
GI number: 30065051
Start: 3951736
End: 3952683
Strand: Reverse
Name: iucB
Synonym: S4055
Alternate gene names: 30065051
Gene position: 3952683-3951736 (Counterclockwise)
Preceding gene: 30065052
Following gene: 30065050
Centisome position: 85.94
GC content: 56.43
Gene sequence:
>948_bases ATGTCTGAGGCAAACATTATTCACAGCAGATATGGACTGCGCTGTGAAAAACTCGACAAGCCCCTGAATCTTGGCTGGGG ACTGGACAATAGCGCGGTGTTGCACTGTCCCGGGGAGCTGCCGACAGGGTGGCTGTGCGATGCGCTGGATCAGATATTTA TCGCCGCACCACAACTGTCAGCAGTGGCTCTCCCCTGGGCCGAATGGCGTGAGGAGCCACAGGCGCTGACGCTTTTTGGG CAGGTAAAAAGCGACATTATCCATCGTACTGCCTTCTGGCAGTTACCGTTATGGTTGAGTTCACCGGCAAACCGGGCCTC CGGTGAAATGGTTTTTGATGCAGAGCGTGAGATTTATTTCCCGCAGCGCCCACCCCGTCCACAGGGTGAGGTTTACCGCC GTTACGATCCACGTATTCGCAGGATGCTGAGTTTCCGCATTGCCGATCCCGTTTCTGATGCAGAACGTTTCACCCGCTGG ATGAATGATCCGCGCGTTGAGTATTTCTGGGAGCAAAGTGGCTCACTGGAGGTACAGACCGCCTATCTGGAGCGCCAGCT CACCGGTAAACATGCATTCCCGCTGATTGGGTGCTTCGACGATCGGCCATTCAGCTATTTCGAAATCTACTGGGCGGCGG AAGACCGCATTGGTCGTCACTATTCGTGGCAGCCCTTTGACCGTGGCCTGCATCTGCTGGTTGGTGAACAGCAATGGCGC GGGGCCCACTATGTGCAAAGCTGGCTGCGCGGGCTGACACATTACCTGCTGCTGGATGAGCCCCGTACGCAGCGCACAGT ACTGGAGCCACGCACCGATAACCAGCGCCTGTTCCGCCATCTTGAGCCTGCGGGATACCGGACAATTAAAGAGTTCGACT TCCCACATAAGCGCTCGCGCATGGTGATGGCGGATCGTCATCACTTCTTCACGGAGGTCGGTCTGTAA
Upstream 100 bases:
>100_bases CTTTTTCTGTTATCTGAACGATCATAACGAGAACACCATTGTTGACCCTTCGGTGATCTATTTCGATTTCGCTAACCCGC TGCAGGCTCAGGAGGTCTGA
Downstream 100 bases:
>100_bases TGAATCACAAGGACTGGGATTTTGTTAACCGTCGGCTGGTGGCAAAAATGTTGTCTGAGATGGAGTATGAGCAGGTTTTC CACGCGGAATCTCAGGGCGA
Product: siderophore biosynthesis protein
Products: CoA; N6-acetyl-N6-hydroxy-L-lysine
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSEANIIHSRYGLRCEKLDKPLNLGWGLDNSAVLHCPGELPTGWLCDALDQIFIAAPQLSAVALPWAEWREEPQALTLFG QVKSDIIHRTAFWQLPLWLSSPANRASGEMVFDAEREIYFPQRPPRPQGEVYRRYDPRIRRMLSFRIADPVSDAERFTRW MNDPRVEYFWEQSGSLEVQTAYLERQLTGKHAFPLIGCFDDRPFSYFEIYWAAEDRIGRHYSWQPFDRGLHLLVGEQQWR GAHYVQSWLRGLTHYLLLDEPRTQRTVLEPRTDNQRLFRHLEPAGYRTIKEFDFPHKRSRMVMADRHHFFTEVGL
Sequences:
>Translated_315_residues MSEANIIHSRYGLRCEKLDKPLNLGWGLDNSAVLHCPGELPTGWLCDALDQIFIAAPQLSAVALPWAEWREEPQALTLFG QVKSDIIHRTAFWQLPLWLSSPANRASGEMVFDAEREIYFPQRPPRPQGEVYRRYDPRIRRMLSFRIADPVSDAERFTRW MNDPRVEYFWEQSGSLEVQTAYLERQLTGKHAFPLIGCFDDRPFSYFEIYWAAEDRIGRHYSWQPFDRGLHLLVGEQQWR GAHYVQSWLRGLTHYLLLDEPRTQRTVLEPRTDNQRLFRHLEPAGYRTIKEFDFPHKRSRMVMADRHHFFTEVGL >Mature_314_residues SEANIIHSRYGLRCEKLDKPLNLGWGLDNSAVLHCPGELPTGWLCDALDQIFIAAPQLSAVALPWAEWREEPQALTLFGQ VKSDIIHRTAFWQLPLWLSSPANRASGEMVFDAEREIYFPQRPPRPQGEVYRRYDPRIRRMLSFRIADPVSDAERFTRWM NDPRVEYFWEQSGSLEVQTAYLERQLTGKHAFPLIGCFDDRPFSYFEIYWAAEDRIGRHYSWQPFDRGLHLLVGEQQWRG AHYVQSWLRGLTHYLLLDEPRTQRTVLEPRTDNQRLFRHLEPAGYRTIKEFDFPHKRSRMVMADRHHFFTEVGL
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR019432 [H]
Pfam domain/function: PF10331 AlcB [H]
EC number: 2.3.1.102
Molecular weight: Translated: 37233; Mature: 37101
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEANIIHSRYGLRCEKLDKPLNLGWGLDNSAVLHCPGELPTGWLCDALDQIFIAAPQLS CCCCCEEHHHHCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCC AVALPWAEWREEPQALTLFGQVKSDIIHRTAFWQLPLWLSSPANRASGEMVFDAEREIYF EEECCHHHHHCCCCEEEHHHHHHHHHHHHHHHEECCCEECCCCCCCCCCEEEECCCCEEC PQRPPRPQGEVYRRYDPRIRRMLSFRIADPVSDAERFTRWMNDPRVEYFWEQSGSLEVQT CCCCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEH AYLERQLTGKHAFPLIGCFDDRPFSYFEIYWAAEDRIGRHYSWQPFDRGLHLLVGEQQWR HHHHHHHCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCHHCCEEEEECCHHHC GAHYVQSWLRGLTHYLLLDEPRTQRTVLEPRTDNQRLFRHLEPAGYRTIKEFDFPHKRSR CHHHHHHHHHHHHHEEEECCCCCCCEEECCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCC MVMADRHHFFTEVGL EEEEHHHHHHHHCCC >Mature Secondary Structure SEANIIHSRYGLRCEKLDKPLNLGWGLDNSAVLHCPGELPTGWLCDALDQIFIAAPQLS CCCCEEHHHHCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCC AVALPWAEWREEPQALTLFGQVKSDIIHRTAFWQLPLWLSSPANRASGEMVFDAEREIYF EEECCHHHHHCCCCEEEHHHHHHHHHHHHHHHEECCCEECCCCCCCCCCEEEECCCCEEC PQRPPRPQGEVYRRYDPRIRRMLSFRIADPVSDAERFTRWMNDPRVEYFWEQSGSLEVQT CCCCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEH AYLERQLTGKHAFPLIGCFDDRPFSYFEIYWAAEDRIGRHYSWQPFDRGLHLLVGEQQWR HHHHHHHCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCHHCCEEEEECCHHHC GAHYVQSWLRGLTHYLLLDEPRTQRTVLEPRTDNQRLFRHLEPAGYRTIKEFDFPHKRSR CHHHHHHHHHHHHHEEEECCCCCCCEEECCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCC MVMADRHHFFTEVGL EEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acetyl-CoA; N6-hydroxy-L-lysine
Specific reaction: acetyl-CoA + N6-hydroxy-L-lysine = CoA + N6-acetyl-N6-hydroxy-L-lysine
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8003107 [H]