Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is iutA
Identifier: 30065048
GI number: 30065048
Start: 3946459
End: 3948654
Strand: Reverse
Name: iutA
Synonym: S4052
Alternate gene names: 30065048
Gene position: 3948654-3946459 (Counterclockwise)
Preceding gene: 30065049
Following gene: 30065045
Centisome position: 85.85
GC content: 52.64
Gene sequence:
>2196_bases ATGCGCAAAAAGTATATGCCCCGGGCTCTTGGTCCGCTGCTTCTTGTCGTGCTGTCACCAGCTGTCGCCCAGCAAAACGA TGATAATGAGATCATAGTGTCTGCCAGCCGCAGCAATCGAACTGTAGCGGAGATGGCGCAAACCACCTGGGTTATCGAAA ATGCCGAACTGGAGCAGCAGATTCAGGGCGGTAAAGAGCTGAAAGACGCACTGGCTCAGTTAATCCCCGGCCTTGATGTC AGCAGCCAGAGTCGAACCAACTACGGTATGAACATGCGTGGCCGCCCGCTGGTTGTCCTGATTGACGGTGTGCGCCTCAA CTCTTCACGTTCCGACAGCCGACAACTGGACTCTGTCGATCCTTTTAATATCGACCATATTGAAGTGATCTCCGGCGCGA CGGCCCTGTACGGTGGCGGGAGTACCGGAGGGTTGATCAACATCGTGACCAAAAAAGGTCAGCCGGAAACCATGATGGAG TTTGAGGCTGGCACAAAAAGTGGCTTTAACAGCAGTAAAGATCACGATGAGCGCATTGCCGGTGCTGTCTCCGGCGGAAA TGACCATATCTCCGGACGTCTTTCCGTGGCATATCAGAAATTTGGCGGCTGGTTTGACGGTAACGGCGATGCCACCCTGC TTGATAACACCCAGACCGGCCTGCAGCACTCCAATCGGCTGGACATCATGGGAACCGGTACGCTGAACATCGATGAATCC CGGCAGCTTCAACTGATAACGCAGTACTATAAAAGTCAGGGAGACGACAATTACGGGCTTAATCTCGGGAAAGGCTTTTC CGCCATCAGCGGGAGCAGCACACCATACGTCAGTAAGGGGCTGAATTCTGACCGCATTCCCGGCACTGAGCGGCATTTGA TCAGCCTGCAGTACTCTGACAGTGATTTCCTGGGACAGGAACTGGTCGGTCAGGTTTACTACCGCGATGAGTCGTTGCGG TACTACCCGTTCCCGACGGTAAATGCGAATAAACAGGCGACGGCTTTCTCCTCGTCACAGCAGGATACCGACCAGTACGG CATGAAACTGACTCTGAACAGCCAACTGATGGACGGCTGGCAAATCACCTGGGGGCTGGATGCTGAGCATGAGCGCTTTA CCTCCAACCAGATGTTCTTCGATCTGGCTCAGGCAAGTGCTTCCGGAGGGCTGAACAACCATAAGATTTACACCACCGGG CGCTATCCGTCATATGACATCACCAATCTGGCGGCCTTCCTGCAATCCAGCTATGACATTAATGATATTTTTACCGTTAG CGGTGGCGTACGCTATCAGTATACTGAGAACAGGGTAGATGATTTCATCGACTACACGCAGCAACAGAAGATTGCTACCG GGAAGGCGATATCTGCCGACGCCATTCCTGGTGGTTCGGTAGATTACGATAACTTTCTGTTCAATGCTGGTCTGCTGATG CACATCACCGAACGTCAGCAGGCATGGTTCAATTTTTCCCAGGGGGTGGCATTGCCGGATCCGGGGAAATATTATGGTCG CGGCATCTATGGTGCAGCAGTGAACGGCCATCTTCCCCTGACAAAGAGCGTGAACGTCAGCGACAGTAAGCTGGAAGGCG TGAAAGTCGATTCTTATGAACTGGGCTGGCGCTTTATCGGTGACAACCTGCGGACTCAAATCGCGGCATATTACTCGCTT TCCAATAAGAGCGTGGAAAGGAATAAAGATCTGACCATCAGTGTGAAGGACGACAGGCGCCGTATTTACGGCGTGGAAGG TGCGGTGGACTACCTGATCCCGGATACTGACTGGAGTACCGGTGTGAACTTCAATGTGCTGAAAACCGAGTCGAAAGTGA ACGGTCAATGGCAAAAATATGACGTGAAGGAATCAAGTCCATCGAAAGCGACAGCTTACATTAACTGGGCGCCGGAACCG TGGAGTCTGCGTGTACAGAGCACCACTTCTTTCGACGTAAGCGATGCAGAGGGTAACGATATTAATGGTTACACTACCGT CGATTTTATCAGTAGTTGGCAGCTTCCGGTGGGAACACTCAGCTTCAGCGTTGAGAACCTCTTCGACCGTGACTATACCA CTGTCTGGGGACAGCGTGCACCTCTGTACTACAGCCCGGGTTACGGCCCTGCTTCACTGTACGACTACAAAGGCCGGGGC CGAACCTTTGGTCTGAACTACTCAGTGCTGTTCTGA
Upstream 100 bases:
>100_bases CGCCCGCACTGATTCAGTGGCGCAGCGGCAGCCGGAAAAAACCACAGCCGGAGGCTGCTTCTTTAACTCACTATACAGCA AATATTCAGGAATAACGATG
Downstream 100 bases:
>100_bases CGGGGATGCTTTTGCAACAAGGGTATGCTGTAAACAACATGGTCCTTGGTGGCCATGTTGTTTACAGCCAGTATAATATA CAGCCTTAACAAGATATTCC
Product: putative ferric siderophore receptor
Products: NA
Alternate protein names: Cloacin receptor [H]
Number of amino acids: Translated: 731; Mature: 731
Protein sequence:
>731_residues MRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAEMAQTTWVIENAELEQQIQGGKELKDALAQLIPGLDV SSQSRTNYGMNMRGRPLVVLIDGVRLNSSRSDSRQLDSVDPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMME FEAGTKSGFNSSKDHDERIAGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQTGLQHSNRLDIMGTGTLNIDES RQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPYVSKGLNSDRIPGTERHLISLQYSDSDFLGQELVGQVYYRDESLR YYPFPTVNANKQATAFSSSQQDTDQYGMKLTLNSQLMDGWQITWGLDAEHERFTSNQMFFDLAQASASGGLNNHKIYTTG RYPSYDITNLAAFLQSSYDINDIFTVSGGVRYQYTENRVDDFIDYTQQQKIATGKAISADAIPGGSVDYDNFLFNAGLLM HITERQQAWFNFSQGVALPDPGKYYGRGIYGAAVNGHLPLTKSVNVSDSKLEGVKVDSYELGWRFIGDNLRTQIAAYYSL SNKSVERNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGQWQKYDVKESSPSKATAYINWAPEP WSLRVQSTTSFDVSDAEGNDINGYTTVDFISSWQLPVGTLSFSVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGRG RTFGLNYSVLF
Sequences:
>Translated_731_residues MRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAEMAQTTWVIENAELEQQIQGGKELKDALAQLIPGLDV SSQSRTNYGMNMRGRPLVVLIDGVRLNSSRSDSRQLDSVDPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMME FEAGTKSGFNSSKDHDERIAGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQTGLQHSNRLDIMGTGTLNIDES RQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPYVSKGLNSDRIPGTERHLISLQYSDSDFLGQELVGQVYYRDESLR YYPFPTVNANKQATAFSSSQQDTDQYGMKLTLNSQLMDGWQITWGLDAEHERFTSNQMFFDLAQASASGGLNNHKIYTTG RYPSYDITNLAAFLQSSYDINDIFTVSGGVRYQYTENRVDDFIDYTQQQKIATGKAISADAIPGGSVDYDNFLFNAGLLM HITERQQAWFNFSQGVALPDPGKYYGRGIYGAAVNGHLPLTKSVNVSDSKLEGVKVDSYELGWRFIGDNLRTQIAAYYSL SNKSVERNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGQWQKYDVKESSPSKATAYINWAPEP WSLRVQSTTSFDVSDAEGNDINGYTTVDFISSWQLPVGTLSFSVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGRG RTFGLNYSVLF >Mature_731_residues MRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAEMAQTTWVIENAELEQQIQGGKELKDALAQLIPGLDV SSQSRTNYGMNMRGRPLVVLIDGVRLNSSRSDSRQLDSVDPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMME FEAGTKSGFNSSKDHDERIAGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQTGLQHSNRLDIMGTGTLNIDES RQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPYVSKGLNSDRIPGTERHLISLQYSDSDFLGQELVGQVYYRDESLR YYPFPTVNANKQATAFSSSQQDTDQYGMKLTLNSQLMDGWQITWGLDAEHERFTSNQMFFDLAQASASGGLNNHKIYTTG RYPSYDITNLAAFLQSSYDINDIFTVSGGVRYQYTENRVDDFIDYTQQQKIATGKAISADAIPGGSVDYDNFLFNAGLLM HITERQQAWFNFSQGVALPDPGKYYGRGIYGAAVNGHLPLTKSVNVSDSKLEGVKVDSYELGWRFIGDNLRTQIAAYYSL SNKSVERNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGQWQKYDVKESSPSKATAYINWAPEP WSLRVQSTTSFDVSDAEGNDINGYTTVDFISSWQLPVGTLSFSVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGRG RTFGLNYSVLF
Specific function: Receptor for cloacin DF13/aerobactin [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1788478, Length=151, Percent_Identity=29.1390728476821, Blast_Score=62, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80957; Mature: 80957
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAEMAQTTWVIENAELEQQ CCCCCCCHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCCCHHHHHHHHEEEEECCHHHHH IQGGKELKDALAQLIPGLDVSSQSRTNYGMNMRGRPLVVLIDGVRLNSSRSDSRQLDSVD HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEECCCCCCCCCCCCCC PFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMMEFEAGTKSGFNSSKDHDERIA CCCCCEEEEECCCEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHE GAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQTGLQHSNRLDIMGTGTLNIDES EEECCCCCCCCCEEEEEEHHHCCEECCCCCEEEECCCHHCCCCCCEEEEEECCEECCCCC RQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPYVSKGLNSDRIPGTERHLISLQYSD CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEECC SDFLGQELVGQVYYRDESLRYYPFPTVNANKQATAFSSSQQDTDQYGMKLTLNSQLMDGW CHHHHHHHHHEEEEECCCCEECCCCCCCCCCCCEECCCCCCCHHHCCEEEEECCCCCCCE QITWGLDAEHERFTSNQMFFDLAQASASGGLNNHKIYTTGRYPSYDITNLAAFLQSSYDI EEEECCCCCHHHHCCCCCEEEEHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCC NDIFTVSGGVRYQYTENRVDDFIDYTQQQKIATGKAISADAIPGGSVDYDNFLFNAGLLM CEEEEECCCEEEEECHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHEECCCEEE HITERQQAWFNFSQGVALPDPGKYYGRGIYGAAVNGHLPLTKSVNVSDSKLEGVKVDSYE EEECHHHHHHHHCCCCCCCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCEE LGWRFIGDNLRTQIAAYYSLSNKSVERNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWST CCEEEECCCHHHEEEEEEEECCCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCC GVNFNVLKTESKVNGQWQKYDVKESSPSKATAYINWAPEPWSLRVQSTTSFDVSDAEGND CCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCEECCCCCCCC INGYTTVDFISSWQLPVGTLSFSVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGRG CCCEEEEEEEECCCCCCEEEEEEHHHHHCCCCHHHCCCCCCEEECCCCCCCCEEEECCCC RTFGLNYSVLF EEEEEEEEEEC >Mature Secondary Structure MRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAEMAQTTWVIENAELEQQ CCCCCCCHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCCCHHHHHHHHEEEEECCHHHHH IQGGKELKDALAQLIPGLDVSSQSRTNYGMNMRGRPLVVLIDGVRLNSSRSDSRQLDSVD HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEECCCCCCCCCCCCCC PFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMMEFEAGTKSGFNSSKDHDERIA CCCCCEEEEECCCEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHE GAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQTGLQHSNRLDIMGTGTLNIDES EEECCCCCCCCCEEEEEEHHHCCEECCCCCEEEECCCHHCCCCCCEEEEEECCEECCCCC RQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPYVSKGLNSDRIPGTERHLISLQYSD CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEECC SDFLGQELVGQVYYRDESLRYYPFPTVNANKQATAFSSSQQDTDQYGMKLTLNSQLMDGW CHHHHHHHHHEEEEECCCCEECCCCCCCCCCCCEECCCCCCCHHHCCEEEEECCCCCCCE QITWGLDAEHERFTSNQMFFDLAQASASGGLNNHKIYTTGRYPSYDITNLAAFLQSSYDI EEEECCCCCHHHHCCCCCEEEEHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCC NDIFTVSGGVRYQYTENRVDDFIDYTQQQKIATGKAISADAIPGGSVDYDNFLFNAGLLM CEEEEECCCEEEEECHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHEECCCEEE HITERQQAWFNFSQGVALPDPGKYYGRGIYGAAVNGHLPLTKSVNVSDSKLEGVKVDSYE EEECHHHHHHHHCCCCCCCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCEE LGWRFIGDNLRTQIAAYYSLSNKSVERNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWST CCEEEECCCHHHEEEEEEEECCCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCC GVNFNVLKTESKVNGQWQKYDVKESSPSKATAYINWAPEPWSLRVQSTTSFDVSDAEGND CCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCEECCCCCCCC INGYTTVDFISSWQLPVGTLSFSVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGRG CCCEEEEEEEECCCCCCEEEEEEHHHHHCCCCHHHCCCCCCEEECCCCCCCCEEEECCCC RTFGLNYSVLF EEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA