Definition | Shigella flexneri 2a str. 2457T, complete genome. |
---|---|
Accession | NC_004741 |
Length | 4,599,354 |
Click here to switch to the map view.
The map label for this gene is pstC
Identifier: 30065042
GI number: 30065042
Start: 3936767
End: 3937678
Strand: Reverse
Name: pstC
Synonym: S4044
Alternate gene names: 30065042
Gene position: 3937678-3936767 (Counterclockwise)
Preceding gene: 30065043
Following gene: 30065041
Centisome position: 85.61
GC content: 55.04
Gene sequence:
>912_bases ATGGCTGCAACCAAGCCCGCTTTTAACCCACCGGGTAAAAAGGGCGACATAATTTTCAGCGTGCTGGTAAAACTGGCGGC GCTGATTGTGCTATTGATGTTGGGTGGCATTATTGTCTCTCTGATCATCTCCTCCTGGCCGAGCATTCAGAAATTTGGTC TGGCTTTCCTATGGACCAAAGAGTGGGATGCACCGAACGATATCTACGGGGCGCTGGTGCCGATCTACGGTACGTTGGTG ACTTCGTTTATCGCGCTGCTGATCGCCGTCCCGGTGAGTTTCGGTATCGCCCTGTTCCTGACTGAGCTTGCGCCTGGCTG GCTGAAACGCCCGCTGGGTATCGCCATTGAGCTGCTGGCAGCCATTCCAAGTATCGTTTACGGCATGTGGGGCCTGTTTA TCTTTGCGCCGCTGTTCGCCGTTTACTTTCAGGAGCCGGTCGGCAATATCATGTCGAATATCCCGATTGTTGGCGCGCTG TTCTCTGGCCCCGCATTTGGTATCGGTATCCTCGCGGCAGGCGTGATCCTCGCCATCATGATTATTCCGTACATTGCGGC GGTAATGCGTGATGTGTTCGAACAAACCCCGGTGATGATGAAAGAGTCGGCCTACGGTATTGGCTGCACCACCTGGGAAG TTATCTGGCGTATCGTTCTTCCGTTCACCAAAAATGGTGTTATCGGCGGCATCATGCTGGGGCTGGGCCGCGCGCTCGGT GAAACCATGGCGGTGACCTTTATCATCGGTAACACCTACCAGCTCGACAGCGCCTCGCTGTACATGCCGGGCAATAGTAT CACCTCTGCGCTGGCGAACGAATTTGCGGAAGCGGAATCCGGTCTGCACGTTGCCGCACTGATGGAACTGGGCCTGATCC TGTTTGTGATTACCTTCATCGTCCTGGCCTGA
Upstream 100 bases:
>100_bases AGCCGCTGTACTAATAAAACTCCAGGCCGGGTACGGTGTTTTACGCCGCATCCGGCATTACAAAATGACTTTGTAAACGC GTTTAACTGAAGAGTAACTT
Downstream 100 bases:
>100_bases TCGAAGTTTATGATTATGCGCCTGGCTAAGAATGAGGGGGCACGCTAATGGCTATGGTTGAAATGCAAACCACTGCGGCG CTGGCTGAATCTCGCCGCAA
Product: phosphate transporter permease subunit PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIISSWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLV TSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGAL FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALG ETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFIVLA
Sequences:
>Translated_303_residues MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIISSWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLV TSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGAL FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALG ETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFIVLA >Mature_302_residues AATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIISSWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLVT SFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGALF SGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALGE TMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFIVLA
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain
Homologues:
Organism=Escherichia coli, GI1790164, Length=303, Percent_Identity=100, Blast_Score=588, Evalue=1e-169,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSTC_ECO57 (P0AGH9)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: G86057 - PIR: G91211 - RefSeq: NP_290359.1 - RefSeq: NP_312690.1 - ProteinModelPortal: P0AGH9 - EnsemblBacteria: EBESCT00000024971 - EnsemblBacteria: EBESCT00000058362 - GeneID: 915372 - GeneID: 960700 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z5218 - KEGG: ecs:ECs4663 - GeneTree: EBGT00050000010877 - HOGENOM: HBG705496 - OMA: IASMPTI - ProtClustDB: PRK11275 - BioCyc: ECOL83334:ECS4663-MONOMER - InterPro: IPR000515 - InterPro: IPR011864 - TIGRFAMs: TIGR02138
Pfam domain/function: PF00528 BPD_transp_1
EC number: NA
Molecular weight: Translated: 32316; Mature: 32185
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x161b9660)-; HASH(0x16329458)-; HASH(0x163318e0)-; HASH(0x14f25dd0)-; HASH(0x159c17c4)-; HASH(0x16195d9c)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIISSWPSIQKFGLAFLWTK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEC EWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGALFSGPAFGIGILAAGVILAIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHH IIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALG HHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFI HHHEEEEEECCEEEECCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VLA HHH >Mature Secondary Structure AATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIISSWPSIQKFGLAFLWTK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEC EWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGALFSGPAFGIGILAAGVILAIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHH IIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALG HHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFI HHHEEEEEECCEEEECCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VLA HHH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796