Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is bglB
Identifier: 30065036
GI number: 30065036
Start: 3930037
End: 3931086
Strand: Reverse
Name: bglB
Synonym: S4038
Alternate gene names: 30065036
Gene position: 3931086-3930037 (Counterclockwise)
Preceding gene: 30065037
Following gene: 30065035
Centisome position: 85.47
GC content: 49.9
Gene sequence:
>1050_bases ATGAAAGCATTTCCAGAAACATTTCTTTGGGGTGGCGCAACAGCTGCCAATCAGGTGGAAGGTGCCTGGCTGGAAGATGG CAAAGGGATCACGACCTCAGATTTACAGCCTCATGGCGTAATGGGAAAAATGGAACCGCGCATCCTGGGGAAAGAGAATA TCAAAGATGTCGCCATCGATTTTTATTACCGTTACCCGGAAGATATCGCGTTATTTGCCGAGATGGGCTTCACCTGTCTG CGTATTTCCATTGCCTGGGCGCGAATTTTCCCTCAGGGCGACGAAGCCGAACCGAATGAAGCGGGGTTAGCGTTTTACGA TCGGCTGTTTGATGAAATGGCGCAGGCGGGGATCAAGCCGCTGGTAACGTTATCCCATTACGAAATGCTATATGGGCTGG TGAAAAACTACGGCGGTTGGGCTAATCGGGCGGTCATCGATCACTTCGAGCATTACGCCCGCACGGTCTTTACCCGCTAC CAACATAAAGTAGCGTTATGGCTGACGTTTAATGAAATCAATATGTCGTTACACGCGCCATTCACGGGCGTGGGGCTGGC AGAAGAGAGTGGCGAGGCGGAAGTTTATCAGGCGATCCATCATCAACTGGTTGCCAGTGCGCGGGCAGTTAAAGCCTATC ATAGCCTGATCCCCGAAGCGAAAATCGGCAATATGCTTCTCGGTGGGCTGGTTTACCCCCTCACCTGCCAGCCACAGGAT ATGTTGCAGGCCATGGAAGAGAACCGGCGCTGGATGTTCTTTGGTGATGTTCAGGCGCGTGGCCAATATCCCGGCTATAT GCAGCGTTTCTTCCGCGACCACAATATCACCATTGAGATGACTGAAAGTGACGCAGAAGATTTAAAACATACTGTAGATT TCATCTCTTTTAGTTATTACATGACTGGTTGTGTTTCCCACGACGAAAGCATTAATAAAAATGCGCAGGGCAACATACTG AATATGATCCCCAATCCGCATCTGAAAAGTTCAGAGTGGGGGTGGCAAATTGATCCGGTTGGATTACGGGTAATGCTGCC AACTTACTGA
Upstream 100 bases:
>100_bases TAGCGATGATTTTACAGACGTATTACCCCACGGCACGGCGCAGATAAGCGCAGGTGAACCGCTGTTATCCATCATTCGCT AACGATAAAAGGAGTTAATT
Downstream 100 bases:
>100_bases TTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGG CGTGGTGCGTAACGGCAAAA
Product: phospho-beta-glucosidase B cryptic
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKAFPETFLWGGATAANQVEGAWLEDGKGITTSDLQPHGVMGKMEPRILGKENIKDVAIDFYYRYPEDIALFAEMGFTCL RISIAWARIFPQGDEAEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMLYGLVKNYGGWANRAVIDHFEHYARTVFTRY QHKVALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKAYHSLIPEAKIGNMLLGGLVYPLTCQPQD MLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYMTGCVSHDESINKNAQGNIL NMIPNPHLKSSEWGWQIDPVGLRVMLPTY
Sequences:
>Translated_349_residues MKAFPETFLWGGATAANQVEGAWLEDGKGITTSDLQPHGVMGKMEPRILGKENIKDVAIDFYYRYPEDIALFAEMGFTCL RISIAWARIFPQGDEAEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMLYGLVKNYGGWANRAVIDHFEHYARTVFTRY QHKVALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKAYHSLIPEAKIGNMLLGGLVYPLTCQPQD MLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYMTGCVSHDESINKNAQGNIL NMIPNPHLKSSEWGWQIDPVGLRVMLPTY >Mature_349_residues MKAFPETFLWGGATAANQVEGAWLEDGKGITTSDLQPHGVMGKMEPRILGKENIKDVAIDFYYRYPEDIALFAEMGFTCL RISIAWARIFPQGDEAEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMLYGLVKNYGGWANRAVIDHFEHYARTVFTRY QHKVALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKAYHSLIPEAKIGNMLLGGLVYPLTCQPQD MLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYMTGCVSHDESINKNAQGNIL NMIPNPHLKSSEWGWQIDPVGLRVMLPTY
Specific function: Can hydrolyze salicin and arbutin [H]
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI32481206, Length=319, Percent_Identity=31.0344827586207, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI13273313, Length=367, Percent_Identity=29.700272479564, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI110681710, Length=380, Percent_Identity=28.9473684210526, Blast_Score=135, Evalue=4e-32, Organism=Homo sapiens, GI28376633, Length=359, Percent_Identity=27.0194986072423, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI24497614, Length=319, Percent_Identity=30.4075235109718, Blast_Score=118, Evalue=8e-27, Organism=Escherichia coli, GI2367270, Length=348, Percent_Identity=97.4137931034483, Blast_Score=714, Evalue=0.0, Organism=Escherichia coli, GI1789070, Length=357, Percent_Identity=50.140056022409, Blast_Score=367, Evalue=1e-103, Organism=Escherichia coli, GI2367174, Length=357, Percent_Identity=47.8991596638655, Blast_Score=322, Evalue=2e-89, Organism=Caenorhabditis elegans, GI17552856, Length=318, Percent_Identity=29.874213836478, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17539390, Length=320, Percent_Identity=28.75, Blast_Score=131, Evalue=6e-31, Organism=Drosophila melanogaster, GI21356577, Length=328, Percent_Identity=27.4390243902439, Blast_Score=116, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.86 [H]
Molecular weight: Translated: 39671; Mature: 39671
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00653 GLYCOSYL_HYDROL_F1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFPETFLWGGATAANQVEGAWLEDGKGITTSDLQPHGVMGKMEPRILGKENIKDVAID CCCCCCHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE FYYRYPEDIALFAEMGFTCLRISIAWARIFPQGDEAEPNEAGLAFYDRLFDEMAQAGIKP EEEECCHHHHHHHHHCCHHHHHEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC LVTLSHYEMLYGLVKNYGGWANRAVIDHFEHYARTVFTRYQHKVALWLTFNEINMSLHAP EEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECEEEECC FTGVGLAEESGEAEVYQAIHHQLVASARAVKAYHSLIPEAKIGNMLLGGLVYPLTCQPQD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEEECCHHH MLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYY HHHHHHCCCCEEEEECEECCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHH MTGCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVMLPTY HHHHHCCCHHCCCCCCCCEEEECCCCCCCCCCCCEEECCCCEEEEECCC >Mature Secondary Structure MKAFPETFLWGGATAANQVEGAWLEDGKGITTSDLQPHGVMGKMEPRILGKENIKDVAID CCCCCCHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE FYYRYPEDIALFAEMGFTCLRISIAWARIFPQGDEAEPNEAGLAFYDRLFDEMAQAGIKP EEEECCHHHHHHHHHCCHHHHHEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC LVTLSHYEMLYGLVKNYGGWANRAVIDHFEHYARTVFTRYQHKVALWLTFNEINMSLHAP EEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECEEEECC FTGVGLAEESGEAEVYQAIHHQLVASARAVKAYHSLIPEAKIGNMLLGGLVYPLTCQPQD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEEECCHHH MLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYY HHHHHHCCCCEEEEECEECCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHH MTGCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVMLPTY HHHHHCCCHHCCCCCCCCEEEECCCCCCCCCCCCEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3034860; 7686882; 9278503; 3309161 [H]