| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yigJ
Identifier: 30064880
GI number: 30064880
Start: 3751792
End: 3752160
Strand: Reverse
Name: yigJ
Synonym: S3854
Alternate gene names: 30064880
Gene position: 3752160-3751792 (Counterclockwise)
Preceding gene: 30064881
Following gene: 30064878
Centisome position: 81.58
GC content: 50.95
Gene sequence:
>369_bases ATGGGTTACCAGATGCTACGCGGTGCACTGAAAAAAGAGGCTGTATCTGCGCCTGCACCACAGGTTGAGCTGGCGAAAAG CGGGCGCAGTTTCCTGAAAGGCTTACTGACCAATCTCGCCAATCCGAAAGCGATTATCTATTTTGGTTCGGTATTCTCAT TGTTTGTCGGCGATAACGTTGGCACTACCGAGCGCTGGGGCATTTTCGCGTTGATTATTGTCGAAACACTGGCGTGGTTT ACCGTCGTTGCCAGTCTGTTTGCCCTGCCGCAAATGCGCCGTGGTTATCAACGTCTGGCGAAGTGGATTGATGGTTTTGC CGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGA
Upstream 100 bases:
>100_bases TTGGGCTGGGATTGCGTTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTAGGCG GTGGCCTGTATCTCTGCTGG
Downstream 100 bases:
>100_bases TGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTATTTTTCACGCATGCCTCGCCGAT GCTAACAGCGCTCCCACCAG
Product: hypothetical protein
Products: Proton [Cytoplasm]; L-threonine [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTERWGIFALIIVETLAWF TVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR
Sequences:
>Translated_122_residues MGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTERWGIFALIIVETLAWF TVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR >Mature_121_residues GYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTERWGIFALIIVETLAWFT VVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR
Specific function: Conducts the efflux of threonine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI48994978, Length=122, Percent_Identity=99.1803278688525, Blast_Score=244, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004778 - InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 13353; Mature: 13222
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNV CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCC GTTERWGIFALIIVETLAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLII CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE SR CC >Mature Secondary Structure GYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNV CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCC GTTERWGIFALIIVETLAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLII CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE SR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-threonine [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + L-threonine [Cytoplasm] = Proton [Cytoplasm] + L-threonine [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]