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The map label for this gene is yihF

Identifier: 30064849

GI number: 30064849

Start: 3714903

End: 3716375

Strand: Reverse

Name: yihF

Synonym: S3815

Alternate gene names: 30064849

Gene position: 3716375-3714903 (Counterclockwise)

Preceding gene: 30064850

Following gene: 30064847

Centisome position: 80.8

GC content: 41.28

Gene sequence:

>1473_bases
GTGGATATTCAAAGTTTTGCTGTTTTATCAGGGAATATTTATATGATACGTAAGTCAGCTACAGGTGTTATTGTTGCGTT
AGCCGTAATCTGGGGTGGTGGCACATGGTACACAGGTACGCAAATTCAGCCTGGTATCGAAAAGTTTATTAAAGATTTTA
ACGATGCGAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATAAAAACTTTGACAAAGGCTTTTTTAATTCC
CGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGT
GGATGTTGAGCACGGTCCGTTGCCCATCACAATGTTAATGCATGGTAATGTCATCCCAGCACTGGCAGCGGCAAAAGTGA
ACTTAGTGAATAATGAACTGACACAACCGCTATTTATCGCCGCGAAAAATAAATCGCCCGTGGAAGCGACATTGCGATTC
GCGTTTGGTGGCTCATTCTCTACGACATTAGATGTTGCCCCTGCAGAGTATGGAAAATTTTCTTTTGGTGAGGGCCAGTT
TACTTTTAATGGTGATGGTAGTTCATTGTCTAACCTGGATATTGAAGGCAAAGTCGAAGATATTGTTCTGCAATTATCAC
CAATGAACAAAGTAACGGCAAAAAGTTTTACCATTGATTCTCTGGCGCGATTAGAAGAAAAGAAATTTCCGGTTGGTGAA
AGCGAGTCGAAATTTAATCAGATTAACATTATCAATCACGGGGAAGACGTTGCCCAAATCGATGCTTTCGTTGCAAAAAC
CAGGCTGGATCGCGTTAAAGACAAAGATTATATCAATGTCAATCTGACCTACGAACTTGATAAGTTAACAAAAGGGAATC
AGCAACTCGGTAGTGGTGAGTGGTCATTGATTGCTGAATCTATTGATCCCTCAGCAGTGCGCCAATTTATCATCCAGTAT
AACATTGCGATGCAGAAGCAGCTTGCTGCACACCCTGAGTTAGCAAACGATGAAGTTGCTCTGCAAGAAGTGAATGCTGC
ATTGTTCAAAGAGTATTTACCGTTATTACAAAAAAGTGAGCCGACCATTAAACAACCGGTAAGATGGAAGAACGCACTCG
GCGAACTAAATGCCAATCTGGATATCAGTATTGCCGACCCAGCCAAATCTTCATCATCCACAAACAAAGATATCAAATCG
CTCAATTTTGATGTGAAGTTACCGCTTAATGTCGTCACAGAAACCGCAAAACAGCTTAATTTATCTGAAGGAATGGATGC
GGAAAAAGCGCAAAAGCAGGCTGATAAACAAATCAGCGGGATGATGACATTAGGTCAGATGTTTCAGTTAATCACGATTG
ACAACAATACCGCCTCGCTGCAGCTGCGTTATACACCGGGTAAAGTTGTTTTTAACGGACAGGAGATGAGCGAAGAAGAA
TTTATGTCTCGTGCCGGACGTTTTGTTCATTAA

Upstream 100 bases:

>100_bases
TACATAAAGCCCGTGAATATTCACGGGCTTTTTTTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGC
TGGACATTATTTCAGCATAA

Downstream 100 bases:

>100_bases
AATACTCACTCGCCTCTGCTCATTCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGA
AGCCGGTCTTTTTCCTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MDIQSFAVLSGNIYMIRKSATGVIVALAVIWGGGTWYTGTQIQPGIEKFIKDFNDAKKKGEHAYDMTLSYKNFDKGFFNS
RFQMQMTFDNGAPDLNIKPGQKVVFDVDVEHGPLPITMLMHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRF
AFGGSFSTTLDVAPAEYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLARLEEKKFPVGE
SESKFNQINIINHGEDVAQIDAFVAKTRLDRVKDKDYINVNLTYELDKLTKGNQQLGSGEWSLIAESIDPSAVRQFIIQY
NIAMQKQLAAHPELANDEVALQEVNAALFKEYLPLLQKSEPTIKQPVRWKNALGELNANLDISIADPAKSSSSTNKDIKS
LNFDVKLPLNVVTETAKQLNLSEGMDAEKAQKQADKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEE
FMSRAGRFVH

Sequences:

>Translated_490_residues
MDIQSFAVLSGNIYMIRKSATGVIVALAVIWGGGTWYTGTQIQPGIEKFIKDFNDAKKKGEHAYDMTLSYKNFDKGFFNS
RFQMQMTFDNGAPDLNIKPGQKVVFDVDVEHGPLPITMLMHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRF
AFGGSFSTTLDVAPAEYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLARLEEKKFPVGE
SESKFNQINIINHGEDVAQIDAFVAKTRLDRVKDKDYINVNLTYELDKLTKGNQQLGSGEWSLIAESIDPSAVRQFIIQY
NIAMQKQLAAHPELANDEVALQEVNAALFKEYLPLLQKSEPTIKQPVRWKNALGELNANLDISIADPAKSSSSTNKDIKS
LNFDVKLPLNVVTETAKQLNLSEGMDAEKAQKQADKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEE
FMSRAGRFVH
>Mature_490_residues
MDIQSFAVLSGNIYMIRKSATGVIVALAVIWGGGTWYTGTQIQPGIEKFIKDFNDAKKKGEHAYDMTLSYKNFDKGFFNS
RFQMQMTFDNGAPDLNIKPGQKVVFDVDVEHGPLPITMLMHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRF
AFGGSFSTTLDVAPAEYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLARLEEKKFPVGE
SESKFNQINIINHGEDVAQIDAFVAKTRLDRVKDKDYINVNLTYELDKLTKGNQQLGSGEWSLIAESIDPSAVRQFIIQY
NIAMQKQLAAHPELANDEVALQEVNAALFKEYLPLLQKSEPTIKQPVRWKNALGELNANLDISIADPAKSSSSTNKDIKS
LNFDVKLPLNVVTETAKQLNLSEGMDAEKAQKQADKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEE
FMSRAGRFVH

Specific function: Unknown

COG id: COG5339

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydgA and H.influenzae HI_1236 [H]

Homologues:

Organism=Escherichia coli, GI87082339, Length=476, Percent_Identity=99.5798319327731, Blast_Score=974, Evalue=0.0,
Organism=Escherichia coli, GI1787900, Length=479, Percent_Identity=34.0292275574113, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010352 [H]

Pfam domain/function: PF06097 DUF945 [H]

EC number: NA

Molecular weight: Translated: 54191; Mature: 54191

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQSFAVLSGNIYMIRKSATGVIVALAVIWGGGTWYTGTQIQPGIEKFIKDFNDAKKKG
CCCCCEEEEECCEEEEEECCCCCEEEEEEHCCCCCEEECCCCCHHHHHHHHHHHHHHHCC
EHAYDMTLSYKNFDKGFFNSRFQMQMTFDNGAPDLNIKPGQKVVFDVDVEHGPLPITMLM
CCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEE
HGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAPAEYGKF
CCCCCHHHHHHEEEEHHCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEECCCCCCCCC
SFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLARLEEKKFPVGE
CCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHCCCCHHHHHHHHHHCCCCCC
SESKFNQINIINHGEDVAQIDAFVAKTRLDRVKDKDYINVNLTYELDKLTKGNQQLGSGE
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCC
WSLIAESIDPSAVRQFIIQYNIAMQKQLAAHPELANDEVALQEVNAALFKEYLPLLQKSE
EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PTIKQPVRWKNALGELNANLDISIADPAKSSSSTNKDIKSLNFDVKLPLNVVTETAKQLN
CCHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCCEEECCHHHHHHHHHHCC
LSEGMDAEKAQKQADKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEE
CCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCEEEEEEECCCEEEECCCCCCHHH
FMSRAGRFVH
HHHHCCCCCC
>Mature Secondary Structure
MDIQSFAVLSGNIYMIRKSATGVIVALAVIWGGGTWYTGTQIQPGIEKFIKDFNDAKKKG
CCCCCEEEEECCEEEEEECCCCCEEEEEEHCCCCCEEECCCCCHHHHHHHHHHHHHHHCC
EHAYDMTLSYKNFDKGFFNSRFQMQMTFDNGAPDLNIKPGQKVVFDVDVEHGPLPITMLM
CCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEE
HGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAPAEYGKF
CCCCCHHHHHHEEEEHHCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEECCCCCCCCC
SFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLARLEEKKFPVGE
CCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHCCCCHHHHHHHHHHCCCCCC
SESKFNQINIINHGEDVAQIDAFVAKTRLDRVKDKDYINVNLTYELDKLTKGNQQLGSGE
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCC
WSLIAESIDPSAVRQFIIQYNIAMQKQLAAHPELANDEVALQEVNAALFKEYLPLLQKSE
EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PTIKQPVRWKNALGELNANLDISIADPAKSSSSTNKDIKSLNFDVKLPLNVVTETAKQLN
CCHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCCEEECCHHHHHHHHHHCC
LSEGMDAEKAQKQADKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEE
CCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCEEEEEEECCCEEEECCCCCCHHH
FMSRAGRFVH
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7881552; 8346018; 9278503 [H]