| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is katG
Identifier: 30064765
GI number: 30064765
Start: 3622125
End: 3624305
Strand: Reverse
Name: katG
Synonym: S3727
Alternate gene names: 30064765
Gene position: 3624305-3622125 (Counterclockwise)
Preceding gene: 30064766
Following gene: 30064764
Centisome position: 78.8
GC content: 55.8
Gene sequence:
>2181_bases ATGAGCACGTCAGACGATATCCATAACACCACAGCCACTGGCAAATGCCCGTTCCATCAGGGCGGTCACGACCAGAGCGC GGGGGCGGGCACAACCACTCGCGACTGGTGGCCAAATCAACTCCGTGTTGACCTGTTAAACCAACATTCTAATCGTTCTA ACCCGCTGGGTGAGGACTTTGACTACCGCAAAGAATTCAGCAAATTAGATTACTACGGCCTGAAAAAAGATCTGAAAGCC CTGCTGACAGAATCTCAGCCGTGGTGGCCAGCCGACTGGGGCAGCTACGCCGGTCTGTTTATTCGTATGGCTTGGCACGG CGCAGGTACTTACCGTTCAATCGATGGACGCGGCGGCGCGGGTCGTGGTCAGCAACGTTTTGCACCGCTGAACTCCTGGC CGGATAACGTAAGCCTCGATAAAGCGCGTCGCCTGTTGTGGCCAATCAAACAGAAATATGGTCAGAAAATCTCCTGGGCC GACCTGTTTATCCTCGCAGGTAACGTGGCGCTGGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGA CGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTCATCCGGAAGCGCTGGCGA AAGCACCGCTGGGTGCAACCGAGATGGGCCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCT GCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGAACGACGAAGAAACCGTGGCGCTGATTGCGGGTGGTCA TACGCTGGGTAAAACCCACGGTGCCGGTCCGACATCAAACGTAGGTCCTGATCCAGAAGCTGCACCGATTGAAGAACAAG GTTTAGGCTGGGCGAGCACTTACGGCAGCGGCGTTGGCGCAGATGCCATTACCTCTGGTCTGGAAGTAGTCTGGACCCAG ACGCCGACCCAGTGGAGCAACTATTTCTTCGAGAATCTGTTCAAGTATGAGTGGGTACAGACCCGCAGTCCGGCTGGAGC AATCCAGTTCGAAGCGGTAGACGCACCGGAAATTATCCCGGATCCGTTCGATCCGTCGAAGAAACGTAAACCGACAATGC TGGTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTC AACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGT GCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTATCGATCTGA AATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGT GGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGT TCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATCGTGCTGGCTGGTG TGGTTGGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGT CAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGA CGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGG GCGGGATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAAT GACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACTGACGAATCGAAAGAGCTGTTCGAAGGACGTGA CCGCGAAACCGGCGAAGTGAAATACACAGCCAGCCGTGCGGATCTGGTATTTGGTTCTAACTCTGTCCTGCGTGCAGTAG CGGAAGTTTACGCCAGCAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTAGCGGCATGGGTGAAAGTGATGAACCTC GACCGTTTCGACCTGCTGTAA
Upstream 100 bases:
>100_bases TATGTAAGATCTCAACTATCGCATCCGTGGATTAATTCAATTATAACTTCTCTCTAACGCTGTGTATCGTAACGGTAACA CTGTAGAGGGGAGCACATTG
Downstream 100 bases:
>100_bases TCTGACCTTCTTCAGCGACTGTCTTTCAGGCAGTCGCTGAAGTTTCTTTACCGGCGTATAGTGTCCACAGGAAAACTACA CACTGGATCTCTCATGTCTG
Product: catalase; hydroperoxidase HPI(I)
Products: NA
Alternate protein names: CP 1; Peroxidase/catalase 1
Number of amino acids: Translated: 726; Mature: 725
Protein sequence:
>726_residues MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVDLLNQHSNRSNPLGEDFDYRKEFSKLDYYGLKKDLKA LLTESQPWWPADWGSYAGLFIRMAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWA DLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLGATEMGLIYVNPEGPDHSGEPLS AAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAGPTSNVGPDPEAAPIEEQGLGWASTYGSGVGADAITSGLEVVWTQ TPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAF NEAFARAWFKLTHRDMGPKSRYIGPEVPKEDLIWQDPLPQPIYNPTEQDIIDLKFAIADSGLSVSELVSVAWASASTFRG GDKRGGANGARLALMPQRDWDVNAAAVRALPVLEKIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDAR QDQTDIEMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFDGSKNGVFTDRVGVLSN DFFVNLLDMRYEWKATDESKELFEGRDRETGEVKYTASRADLVFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNL DRFDLL
Sequences:
>Translated_726_residues MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVDLLNQHSNRSNPLGEDFDYRKEFSKLDYYGLKKDLKA LLTESQPWWPADWGSYAGLFIRMAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWA DLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLGATEMGLIYVNPEGPDHSGEPLS AAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAGPTSNVGPDPEAAPIEEQGLGWASTYGSGVGADAITSGLEVVWTQ TPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAF NEAFARAWFKLTHRDMGPKSRYIGPEVPKEDLIWQDPLPQPIYNPTEQDIIDLKFAIADSGLSVSELVSVAWASASTFRG GDKRGGANGARLALMPQRDWDVNAAAVRALPVLEKIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDAR QDQTDIEMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFDGSKNGVFTDRVGVLSN DFFVNLLDMRYEWKATDESKELFEGRDRETGEVKYTASRADLVFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNL DRFDLL >Mature_725_residues STSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVDLLNQHSNRSNPLGEDFDYRKEFSKLDYYGLKKDLKAL LTESQPWWPADWGSYAGLFIRMAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWAD LFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLGATEMGLIYVNPEGPDHSGEPLSA AAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAGPTSNVGPDPEAAPIEEQGLGWASTYGSGVGADAITSGLEVVWTQT PTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAFN EAFARAWFKLTHRDMGPKSRYIGPEVPKEDLIWQDPLPQPIYNPTEQDIIDLKFAIADSGLSVSELVSVAWASASTFRGG DKRGGANGARLALMPQRDWDVNAAAVRALPVLEKIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQ DQTDIEMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFDGSKNGVFTDRVGVLSND FFVNLLDMRYEWKATDESKELFEGRDRETGEVKYTASRADLVFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNLD RFDLL
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily
Homologues:
Organism=Escherichia coli, GI1790378, Length=726, Percent_Identity=99.8622589531681, Blast_Score=1484, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KATG1_ECO57 (Q7A978)
Other databases:
- EMBL: BA000007 - EMBL: AE005174 - PIR: C86085 - PIR: G91237 - RefSeq: NP_290579.1 - RefSeq: NP_312898.1 - HSSP: P13029 - ProteinModelPortal: Q7A978 - SMR: Q7A978 - PeroxiBase: 2718 - EnsemblBacteria: EBESCT00000025740 - EnsemblBacteria: EBESCT00000057213 - GeneID: 915019 - GeneID: 960189 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z5497 - KEGG: ecs:ECs4871 - GeneTree: EBGT00050000011618 - HOGENOM: HBG285610 - OMA: FEWELTK - ProtClustDB: PRK15061 - BioCyc: ECOL83334:ECS4871-MONOMER - HAMAP: MF_01961 - InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 - PRINTS: PR00460 - PRINTS: PR00458 - TIGRFAMs: TIGR00198
Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super
EC number: =1.11.1.6; =1.11.1.7
Molecular weight: Translated: 80040; Mature: 79909
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4
Important sites: ACT_SITE 106-106
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVDLLNQHSNRSNPLGEDF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC DYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIRMAWHGAGTYRSIDGRGGA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEEEEECCCCCEEECCCCCCC GRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLFILAGNVALENSGFRTFG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCCCEEEC FGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLGATEMGLIYVNPEGPDHSGEPLS CCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHH AAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAGPTSNVGPDPEAAPIEEQGLGWAST HHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCHHH YGSGVGADAITSGLEVVWTQTPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPEIIP CCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC DPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAFNEAFARAWFKLTHRDMGPKS CCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC RYIGPEVPKEDLIWQDPLPQPIYNPTEQDIIDLKFAIADSGLSVSELVSVAWASASTFRG CCCCCCCCHHCCCCCCCCCCCCCCCCCHHHEEEEEEEECCCCCHHHHHHHHHHCCHHCCC GDKRGGANGARLALMPQRDWDVNAAAVRALPVLEKIQKESGKASLADIIVLAGVVGVEKA CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEPIADGFRNYRARLDVSTTESLLIDKAQ HCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCH QLTLTAPEMTALVGGMRVLGANFDGSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESK HEEEECHHHHHHHCCHHEEECCCCCCCCCEEECCCCCCCCCCEEEEECCEEEECCCCCHH ELFEGRDRETGEVKYTASRADLVFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNL HHHCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC DRFDLL CHHHCC >Mature Secondary Structure STSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVDLLNQHSNRSNPLGEDF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC DYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIRMAWHGAGTYRSIDGRGGA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEEEEECCCCCEEECCCCCCC GRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLFILAGNVALENSGFRTFG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCCCEEEC FGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLGATEMGLIYVNPEGPDHSGEPLS CCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHH AAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAGPTSNVGPDPEAAPIEEQGLGWAST HHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCHHH YGSGVGADAITSGLEVVWTQTPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPEIIP CCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC DPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAFNEAFARAWFKLTHRDMGPKS CCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC RYIGPEVPKEDLIWQDPLPQPIYNPTEQDIIDLKFAIADSGLSVSELVSVAWASASTFRG CCCCCCCCHHCCCCCCCCCCCCCCCCCHHHEEEEEEEECCCCCHHHHHHHHHHCCHHCCC GDKRGGANGARLALMPQRDWDVNAAAVRALPVLEKIQKESGKASLADIIVLAGVVGVEKA CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEPIADGFRNYRARLDVSTTESLLIDKAQ HCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCH QLTLTAPEMTALVGGMRVLGANFDGSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESK HEEEECHHHHHHHCCHHEEECCCCCCCCCEEECCCCCCCCCCEEEEECCEEEECCCCCHH ELFEGRDRETGEVKYTASRADLVFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNL HHHCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC DRFDLL CHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11258796; 11206551