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The map label for this gene is rspA [H]

Identifier: 30064751

GI number: 30064751

Start: 3597087

End: 3598301

Strand: Reverse

Name: rspA [H]

Synonym: S3707

Alternate gene names: 30064751

Gene position: 3598301-3597087 (Counterclockwise)

Preceding gene: 30064752

Following gene: 30064750

Centisome position: 78.23

GC content: 50.04

Gene sequence:

>1215_bases
ATGAAAATTATTGCTGCAGATGTTTTTGTTACTTGCCCAGGGCGTAATTTCGTTACGCTTAAAATAACCACTGAAAGCGG
ACTTTGTGGATTAGGAGATGCCACGTTAAATGGTCGCGAATTGTCGGTCGCTTCTTATCTGAAAGATCATCTTTGTCCAC
AACTAATTGGCCGCGATGCCAGCCGTATCGAAGATATCTGGCAATTCTTTTATAAAGGTGCTTACTGGCGACGTGGCCCC
GTCACGATGTCAGCCATTTCTGCCATTGATATGGCGTTGTGGGATATCAAAGCTAAAGCGGCAAATATGCCATTGTATCA
ACTGCTTGGTGGTGCTTCTCGTGAAGGCGTGATGGTTTATTGCCACACCACCGGGCGTACGATTGATGAAGTCCTTGAAG
ACTATGCAAAGCACCAGCAGATGGGCTTTAAGGCGATTCGTGTGCAGTGCGGTGTACCGGGTATGCAAACCACTTATGGC
CTGGCGAAGGGCAAAGGACTGGCGTATGAACCGGCAACCAAAGGCCTGTGGCCAGAAGAGCAGTTGTGGTCTTCAGAAAA
GTATCTCGATTTTACGCCGAAGTTATTCGAAGCGGTGCGTAATAAGTTCGGTTTTAACGAACATCTGTTGCATGACATGC
ACCATCGCCTGACCCCCATCGAAGCGGCGCGCTTTGGGAAGAGCATTGAGGATTACCGCCTGTTCTGGATGGAAGATCCG
ACGCCTGCCGAGAACCAGGAATGTTTTCGTCTGATTCGCCAGCATACCGTGACGCCGATTGCGGTCGGTGAAGTGTTTAA
CAGTATCTGGGACTGCAAGCAGTTAATCGAAGAGCAGCTGATTGGCTATATTCGCACGACGATCACCCATGCAGGCGGCA
TTACCGGGATGCGGCGGATTGCCGATTTTGCATCGCTTTATCAGGTACGTACCGGTTCGCATGGCCCTTCAGATTTATCG
CCTGTTTGTCATGCGGCGGCGCTGCATTTTGACCTATGGGTACCAAATTTTGGCGTTCAGGAGTACATGGGCTATTCCGA
ACAAATGCTTGAAGTTTTCCCGTACAGCTGGCGCTTCGAGGAAGGTTATATGCACCCAGGCGATGAACCGGGGCTGGGTA
TTTCTTTCGATGAGAAACTGGCGGCGAAATATCCGTATGACCCGGAGTATCTCCCCGTCGCACGACTGGAAGATGGCACA
TTGTTGAACTGGTAA

Upstream 100 bases:

>100_bases
TAATGTGATCACGGTTGAATAATCGCTTTTTCTCTCTTGTATGGTAGTAGGCGTAAAATTAGGTTTGAAACGTCTATTTA
CAACACAGGAGATTGCAATA

Downstream 100 bases:

>100_bases
TAACGGTTCGCTTAATTATTTTCTGAATAGTCATCAAATCGATTAATTCCGCTCAAGGAGCTAAAAATGGACGTTGATGT
GTCAACCAGTGTTGCGGGTA

Product: putative sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKIIAADVFVTCPGRNFVTLKITTESGLCGLGDATLNGRELSVASYLKDHLCPQLIGRDASRIEDIWQFFYKGAYWRRGP
VTMSAISAIDMALWDIKAKAANMPLYQLLGGASREGVMVYCHTTGRTIDEVLEDYAKHQQMGFKAIRVQCGVPGMQTTYG
LAKGKGLAYEPATKGLWPEEQLWSSEKYLDFTPKLFEAVRNKFGFNEHLLHDMHHRLTPIEAARFGKSIEDYRLFWMEDP
TPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIGYIRTTITHAGGITGMRRIADFASLYQVRTGSHGPSDLS
PVCHAAALHFDLWVPNFGVQEYMGYSEQMLEVFPYSWRFEEGYMHPGDEPGLGISFDEKLAAKYPYDPEYLPVARLEDGT
LLNW

Sequences:

>Translated_404_residues
MKIIAADVFVTCPGRNFVTLKITTESGLCGLGDATLNGRELSVASYLKDHLCPQLIGRDASRIEDIWQFFYKGAYWRRGP
VTMSAISAIDMALWDIKAKAANMPLYQLLGGASREGVMVYCHTTGRTIDEVLEDYAKHQQMGFKAIRVQCGVPGMQTTYG
LAKGKGLAYEPATKGLWPEEQLWSSEKYLDFTPKLFEAVRNKFGFNEHLLHDMHHRLTPIEAARFGKSIEDYRLFWMEDP
TPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIGYIRTTITHAGGITGMRRIADFASLYQVRTGSHGPSDLS
PVCHAAALHFDLWVPNFGVQEYMGYSEQMLEVFPYSWRFEEGYMHPGDEPGLGISFDEKLAAKYPYDPEYLPVARLEDGT
LLNW
>Mature_404_residues
MKIIAADVFVTCPGRNFVTLKITTESGLCGLGDATLNGRELSVASYLKDHLCPQLIGRDASRIEDIWQFFYKGAYWRRGP
VTMSAISAIDMALWDIKAKAANMPLYQLLGGASREGVMVYCHTTGRTIDEVLEDYAKHQQMGFKAIRVQCGVPGMQTTYG
LAKGKGLAYEPATKGLWPEEQLWSSEKYLDFTPKLFEAVRNKFGFNEHLLHDMHHRLTPIEAARFGKSIEDYRLFWMEDP
TPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIGYIRTTITHAGGITGMRRIADFASLYQVRTGSHGPSDLS
PVCHAAALHFDLWVPNFGVQEYMGYSEQMLEVFPYSWRFEEGYMHPGDEPGLGISFDEKLAAKYPYDPEYLPVARLEDGT
LLNW

Specific function: Probably involved in the degradation of homoserine lactone (HSL) or of a metabolite of HSL that signals starvation [H]

COG id: COG4948

COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]

Homologues:

Organism=Escherichia coli, GI1787864, Length=404, Percent_Identity=90.5940594059406, Blast_Score=786, Evalue=0.0,
Organism=Escherichia coli, GI48994953, Length=414, Percent_Identity=30.1932367149758, Blast_Score=177, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018110
- InterPro:   IPR013342
- InterPro:   IPR013341
- InterPro:   IPR001354 [H]

Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]

EC number: NA

Molecular weight: Translated: 45764; Mature: 45764

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00908 MR_MLE_1 ; PS00909 MR_MLE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIAADVFVTCPGRNFVTLKITTESGLCGLGDATLNGRELSVASYLKDHLCPQLIGRDA
CEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHCCCH
SRIEDIWQFFYKGAYWRRGPVTMSAISAIDMALWDIKAKAANMPLYQLLGGASREGVMVY
HHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEE
CHTTGRTIDEVLEDYAKHQQMGFKAIRVQCGVPGMQTTYGLAKGKGLAYEPATKGLWPEE
EECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCEECCCCCCCCCHH
QLWSSEKYLDFTPKLFEAVRNKFGFNEHLLHDMHHRLTPIEAARFGKSIEDYRLFWMEDP
HHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCC
TPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIGYIRTTITHAGGITGMRRI
CCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ADFASLYQVRTGSHGPSDLSPVCHAAALHFDLWVPNFGVQEYMGYSEQMLEVFPYSWRFE
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHCHHHHHHHHCCCCEEEC
EGYMHPGDEPGLGISFDEKLAAKYPYDPEYLPVARLEDGTLLNW
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MKIIAADVFVTCPGRNFVTLKITTESGLCGLGDATLNGRELSVASYLKDHLCPQLIGRDA
CEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHCCCH
SRIEDIWQFFYKGAYWRRGPVTMSAISAIDMALWDIKAKAANMPLYQLLGGASREGVMVY
HHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEE
CHTTGRTIDEVLEDYAKHQQMGFKAIRVQCGVPGMQTTYGLAKGKGLAYEPATKGLWPEE
EECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCEECCCCCCCCCHH
QLWSSEKYLDFTPKLFEAVRNKFGFNEHLLHDMHHRLTPIEAARFGKSIEDYRLFWMEDP
HHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCC
TPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIGYIRTTITHAGGITGMRRI
CCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ADFASLYQVRTGSHGPSDLSPVCHAAALHFDLWVPNFGVQEYMGYSEQMLEVFPYSWRFE
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHCHHHHHHHHCCCCEEEC
EGYMHPGDEPGLGISFDEKLAAKYPYDPEYLPVARLEDGTLLNW
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7545940; 9097039; 9278503 [H]