| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is phnB
Identifier: 30064676
GI number: 30064676
Start: 3489410
End: 3489853
Strand: Reverse
Name: phnB
Synonym: S3614
Alternate gene names: 30064676
Gene position: 3489853-3489410 (Counterclockwise)
Preceding gene: 30064677
Following gene: 30064675
Centisome position: 75.88
GC content: 51.13
Gene sequence:
>444_bases ATGCCGTTAAGTCCCTACCTCTCTTTTGCCGGTAACTGTTCCGACGCGATTGCCTATTATCAACGTACGTTGGGCGCGGA ACTGCTCTATAAAATCAGCTTCGGCGAAATGCCGAAATCAGCGCAGGACAGCGCCGAGAACTGCCCTTCCGGAATGCAAT TTCCCGATACCGCCATCGCTCATGCCAACGTGCGCATTGCCGGAAGCGACATCATGATGAGCGATGCTATACCGTCAGGA AAAGCCAGCTACTCCGGCTTTACGCTGGTGCTCGATTCGCAACAGGTCGAAGAAGGAAAACGCTGGTTTGATAACCTTGC CGCTAACGGAAAAATCGAAATGGCCTGGCAGGAAACTTTCTGGGCGCATGGCTTTGGCAAAGTCACCGATAAATTTGGCG TACCGTGGATGATTAATGTCGTCAAACAACAACCAACGCAATAA
Upstream 100 bases:
>100_bases GACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCAGCCTCTCATCTGTATAAATTTCGAACTACACTTAACTGGCTTC TCTTAACTGAGGTCACCATC
Downstream 100 bases:
>100_bases CCCGCCGGGAGGCCCGCCCTCCCGCACTGTCATCGAATTCCCGTTAACTCTTCATCTGTTAGTCACTTTTAATTAACCAA ATCGTCACAATAATCCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MPLSPYLSFAGNCSDAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSG KASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQQPTQ
Sequences:
>Translated_147_residues MPLSPYLSFAGNCSDAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSG KASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQQPTQ >Mature_146_residues PLSPYLSFAGNCSDAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSGK ASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQQPTQ
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790546, Length=147, Percent_Identity=99.3197278911565, Blast_Score=308, Evalue=1e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16153; Mature: 16022
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSPYLSFAGNCSDAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIA CCCCCCHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHCCCCCCCCCCCEEE HANVRIAGSDIMMSDAIPSGKASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETF ECEEEEECCCEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEHHHH WAHGFGKVTDKFGVPWMINVVKQQPTQ HHCCCCCHHHCCCCCCEEHHHHCCCCC >Mature Secondary Structure PLSPYLSFAGNCSDAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIA CCCCCHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHCCCCCCCCCCCEEE HANVRIAGSDIMMSDAIPSGKASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETF ECEEEEECCCEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEHHHH WAHGFGKVTDKFGVPWMINVVKQQPTQ HHCCCCCHHHCCCCCCEEHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 7610040; 9278503 [H]