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The map label for this gene is yjcF

Identifier: 30064656

GI number: 30064656

Start: 3464558

End: 3465850

Strand: Reverse

Name: yjcF

Synonym: S3593

Alternate gene names: 30064656

Gene position: 3465850-3464558 (Counterclockwise)

Preceding gene: 30064657

Following gene: 30064652

Centisome position: 75.36

GC content: 33.8

Gene sequence:

>1293_bases
ATGCGCTATAATGGTTTAAATAATATGTTTTTCCCTCTTTGCCAGATTAACGATAACCACTCTATCACAAGTTCATCACA
TACAAAGAAAACAAAATCAGATAATTACAGCAAACATCATAAAAACACGTTAATTGACAATAAAGCCCTCTCTCTTTTCA
AAATAGATGATCATGAAAAAGTGATAGGCTTGATTCAGAAAATGAAAAGAATTTATGATAGTTTACCATCAGGAAAAATC
ACGAAAGAAACGGACAGGAAAATACATAAATATTTTATAGATATAGCGTTATATGCAAATAATAAATGTGACGATAGAAT
TACGAGAAGAGTTTACCTTAGTAAAGAAAAGGATGTATCCATTAAGGTGGTATATTTTATAAATAATGTCGCCGTCCATA
ATAATACTATCGAAATTCCACAGATAGTAAATGGTGGTTACGATTTTTCACACCTTAGCCTGAAGGGTATCGTGATTAAA
GATGAAGATTTATCCAATTCGAATTTTGCAGGTTGCAGACTACAAAACGCTATTTTCCAGGACTGTAATATGTATAAAAC
GAATTTTTATTACGCCATAATGGAAAAAATACTTTTTGATAATTGTATTCTCGATGACTCAAATTTCGCTCAGATAAAAA
TGGCCGACGGAACTCTAAATGCATGCTCCGCTATGCATGTTCAATTCTACAATGCAGCAATGAATAGAGCCAATATTAAA
AATACCTTCCTTGACTATTCAAATTTTTATATGGCGTACATGGCTGAGGTAAATCTTTATAAAGTAATAGCGCCATATGT
TAATTTATTTAAAGCCGACCTTAGTTTCTCTAAACTCGATTTAATTAACTTTGAACATGCTGATCTGTCTCGCGTCAATC
TGAACAAAGCAATCCTCCAGAATATAAACTTAATTGATAGCAAACTCTTTTGTACGTGGCTGACAAATACATTCCTCGAA
ATGGTTATATGTACCGGCTCTAATATGGCTAATGTTAATTTTAATAATGCCAATTTAAGCAACTGCCATTTCAACTGTTC
TATTTTAACAAAAGCCTGTATGTTTAATACCCGTCTCTATCGGGTTAATTTCGATGAGGCTAGCGTCCAGGGAATGGGCA
TTTCCATTCTCCGTGGGGAGGAAAATATCCCCATTGATAGTGATACCCTGGTAACACTACAGAAATTCTTTGAAGAAGAT
TGTACCTCTCATACTGGCATGTCACAAACTGAGGATAATATTAATGCAGTCGCTATGAAGATTACTGCAGATATTATGCA
ACACGCAGATTGA

Upstream 100 bases:

>100_bases
ACAAATAAACTCATTAAAAAATGAGCGATTTTTGACAGTCGTAGAAAATGATAATGCAGAGAATATGCCTTTTCTTTCTT
GTTAATTATAAGGATATTTT

Downstream 100 bases:

>100_bases
GGTTAAGTCGAAGAACAGCCAATGAATTGACTTTACAAGAGAGATAACTTATTTGTTTTAGAATCATGAATGTTCGCCCG
AGCTAACCTGTTAAAGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MRYNGLNNMFFPLCQINDNHSITSSSHTKKTKSDNYSKHHKNTLIDNKALSLFKIDDHEKVIGLIQKMKRIYDSLPSGKI
TKETDRKIHKYFIDIALYANNKCDDRITRRVYLSKEKDVSIKVVYFINNVAVHNNTIEIPQIVNGGYDFSHLSLKGIVIK
DEDLSNSNFAGCRLQNAIFQDCNMYKTNFYYAIMEKILFDNCILDDSNFAQIKMADGTLNACSAMHVQFYNAAMNRANIK
NTFLDYSNFYMAYMAEVNLYKVIAPYVNLFKADLSFSKLDLINFEHADLSRVNLNKAILQNINLIDSKLFCTWLTNTFLE
MVICTGSNMANVNFNNANLSNCHFNCSILTKACMFNTRLYRVNFDEASVQGMGISILRGEENIPIDSDTLVTLQKFFEED
CTSHTGMSQTEDNINAVAMKITADIMQHAD

Sequences:

>Translated_430_residues
MRYNGLNNMFFPLCQINDNHSITSSSHTKKTKSDNYSKHHKNTLIDNKALSLFKIDDHEKVIGLIQKMKRIYDSLPSGKI
TKETDRKIHKYFIDIALYANNKCDDRITRRVYLSKEKDVSIKVVYFINNVAVHNNTIEIPQIVNGGYDFSHLSLKGIVIK
DEDLSNSNFAGCRLQNAIFQDCNMYKTNFYYAIMEKILFDNCILDDSNFAQIKMADGTLNACSAMHVQFYNAAMNRANIK
NTFLDYSNFYMAYMAEVNLYKVIAPYVNLFKADLSFSKLDLINFEHADLSRVNLNKAILQNINLIDSKLFCTWLTNTFLE
MVICTGSNMANVNFNNANLSNCHFNCSILTKACMFNTRLYRVNFDEASVQGMGISILRGEENIPIDSDTLVTLQKFFEED
CTSHTGMSQTEDNINAVAMKITADIMQHAD
>Mature_430_residues
MRYNGLNNMFFPLCQINDNHSITSSSHTKKTKSDNYSKHHKNTLIDNKALSLFKIDDHEKVIGLIQKMKRIYDSLPSGKI
TKETDRKIHKYFIDIALYANNKCDDRITRRVYLSKEKDVSIKVVYFINNVAVHNNTIEIPQIVNGGYDFSHLSLKGIVIK
DEDLSNSNFAGCRLQNAIFQDCNMYKTNFYYAIMEKILFDNCILDDSNFAQIKMADGTLNACSAMHVQFYNAAMNRANIK
NTFLDYSNFYMAYMAEVNLYKVIAPYVNLFKADLSFSKLDLINFEHADLSRVNLNKAILQNINLIDSKLFCTWLTNTFLE
MVICTGSNMANVNFNNANLSNCHFNCSILTKACMFNTRLYRVNFDEASVQGMGISILRGEENIPIDSDTLVTLQKFFEED
CTSHTGMSQTEDNINAVAMKITADIMQHAD

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790502, Length=430, Percent_Identity=92.093023255814, Blast_Score=813, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 49193; Mature: 49193

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYNGLNNMFFPLCQINDNHSITSSSHTKKTKSDNYSKHHKNTLIDNKALSLFKIDDHEK
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCEECCCCEEEEEECCHHH
VIGLIQKMKRIYDSLPSGKITKETDRKIHKYFIDIALYANNKCDDRITRRVYLSKEKDVS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEEEEEEECCCCHHHHHHHEEECCCCCCE
IKVVYFINNVAVHNNTIEIPQIVNGGYDFSHLSLKGIVIKDEDLSNSNFAGCRLQNAIFQ
EEEEEEEEEEEEECCEEECCHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEHHHHHH
DCNMYKTNFYYAIMEKILFDNCILDDSNFAQIKMADGTLNACSAMHVQFYNAAMNRANIK
CCCCEEHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCH
NTFLDYSNFYMAYMAEVNLYKVIAPYVNLFKADLSFSKLDLINFEHADLSRVNLNKAILQ
HHHHCHHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHH
NINLIDSKLFCTWLTNTFLEMVICTGSNMANVNFNNANLSNCHFNCSILTKACMFNTRLY
CCCHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCEEEEHHHHHHHHHHCCEEE
RVNFDEASVQGMGISILRGEENIPIDSDTLVTLQKFFEEDCTSHTGMSQTEDNINAVAMK
EEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
ITADIMQHAD
EEHHHHHHCC
>Mature Secondary Structure
MRYNGLNNMFFPLCQINDNHSITSSSHTKKTKSDNYSKHHKNTLIDNKALSLFKIDDHEK
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCEECCCCEEEEEECCHHH
VIGLIQKMKRIYDSLPSGKITKETDRKIHKYFIDIALYANNKCDDRITRRVYLSKEKDVS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEEEEEEECCCCHHHHHHHEEECCCCCCE
IKVVYFINNVAVHNNTIEIPQIVNGGYDFSHLSLKGIVIKDEDLSNSNFAGCRLQNAIFQ
EEEEEEEEEEEEECCEEECCHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEHHHHHH
DCNMYKTNFYYAIMEKILFDNCILDDSNFAQIKMADGTLNACSAMHVQFYNAAMNRANIK
CCCCEEHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCH
NTFLDYSNFYMAYMAEVNLYKVIAPYVNLFKADLSFSKLDLINFEHADLSRVNLNKAILQ
HHHHCHHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHH
NINLIDSKLFCTWLTNTFLEMVICTGSNMANVNFNNANLSNCHFNCSILTKACMFNTRLY
CCCHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCEEEEHHHHHHHHHHCCEEE
RVNFDEASVQGMGISILRGEENIPIDSDTLVTLQKFFEEDCTSHTGMSQTEDNINAVAMK
EEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
ITADIMQHAD
EEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]