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The map label for this gene is yrdA

Identifier: 30064601

GI number: 30064601

Start: 3401985

End: 3402755

Strand: Direct

Name: yrdA

Synonym: S3535

Alternate gene names: 30064601

Gene position: 3401985-3402755 (Clockwise)

Preceding gene: 30064600

Following gene: 30064608

Centisome position: 73.97

GC content: 45.91

Gene sequence:

>771_bases
GTGAAGTGTTTCACGTTGTCGTCTCAACGGAGGCGCATTATAGGGATCCCAATATTTTGCACAAGTATTTTTTTGATCTT
CTTTTCTGTTTGTTGTTTTTTCACCCTTTTTGCTGCAATCGCACACAAAACGGTGCTTTTTTGCATACTAAAAGACTTGC
ACAAGGCCAATAATGCCCCCAAAGTCATTAGTAAATCATTTATTGCTGAGGTAAGTATGTCTGATGTTTTACGCCCATAC
CGCGATCTTTTTCCACAAATCGGTCAGCGCGTAATGATCGACGATAGCAGTGTCGTGATTGGTGACGTTCGTCTGGCTGA
TGATGTGGGGATCTGGCCGCTCGTTGTGATTCGTGGAGATGTACATTATGTACAGATCGGAGCACGCACCAATATCCAGG
ATGGCAGTATGTTGCATGTCACTCATAAATCCTCGTACAACCCAGATGGCAACCCATTAACCATTGGCGAAGATGTCACT
GTTGGTCACAAGGTGATGCTCCACGGCTGCACCATTGGCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGG
CGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGTCCCACAAAATAAACGGCTGGAGAGCGGATATCTGT
ATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTGGGTTACGCTATTCCGCGAATAATTAC
GTGAAATGGAAGGACGAATATCTGGATCAGGGTAACCAGACCCAGCCTTGA

Upstream 100 bases:

>100_bases
GCTTTAGCGCACTGTCGCGAGGTGGCGTATATTACGCTTTCCTCTTTCAGAGTCAACCCTGAATTTCAGGATTTTTTCTC
TTCGTTGTTCCGACCATCCT

Downstream 100 bases:

>100_bases
TCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCA
CTGTTCTGGCGTATCTCCAG

Product: putative transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKCFTLSSQRRRIIGIPIFCTSIFLIFFSVCCFFTLFAAIAHKTVLFCILKDLHKANNAPKVISKSFIAEVSMSDVLRPY
RDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVT
VGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY
VKWKDEYLDQGNQTQP

Sequences:

>Translated_256_residues
MKCFTLSSQRRRIIGIPIFCTSIFLIFFSVCCFFTLFAAIAHKTVLFCILKDLHKANNAPKVISKSFIAEVSMSDVLRPY
RDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVT
VGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY
VKWKDEYLDQGNQTQP
>Mature_256_residues
MKCFTLSSQRRRIIGIPIFCTSIFLIFFSVCCFFTLFAAIAHKTVLFCILKDLHKANNAPKVISKSFIAEVSMSDVLRPY
RDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVT
VGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY
VKWKDEYLDQGNQTQP

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=184, Percent_Identity=100, Blast_Score=379, Evalue=1e-106,
Organism=Escherichia coli, GI1787667, Length=158, Percent_Identity=32.2784810126582, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87081681, Length=177, Percent_Identity=32.2033898305085, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28375; Mature: 28375

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCFTLSSQRRRIIGIPIFCTSIFLIFFSVCCFFTLFAAIAHKTVLFCILKDLHKANNAP
CEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KVISKSFIAEVSMSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEEECCCCCEEEEEEECC
VHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGM
EEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEC
GSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY
CHHHHCCEEEECCEEEECCCCCCCCCCCCCCEEEECCCHHHHCCCCCCHHCCCEECCCCE
VKWKDEYLDQGNQTQP
EEECHHHHCCCCCCCC
>Mature Secondary Structure
MKCFTLSSQRRRIIGIPIFCTSIFLIFFSVCCFFTLFAAIAHKTVLFCILKDLHKANNAP
CEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KVISKSFIAEVSMSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEEECCCCCEEEEEEECC
VHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGM
EEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEC
GSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY
CHHHHCCEEEECCEEEECCCCCCCCCCCCCCEEEECCCHHHHCCCCCCHHCCCEECCCCE
VKWKDEYLDQGNQTQP
EEECHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]