Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is insA [H]
Identifier: 30064595
GI number: 30064595
Start: 3390891
End: 3391166
Strand: Reverse
Name: insA [H]
Synonym: S3520
Alternate gene names: 30064595
Gene position: 3391166-3390891 (Counterclockwise)
Preceding gene: 30064597
Following gene: 30064594
Centisome position: 73.73
GC content: 53.26
Gene sequence:
>276_bases GTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAACGGCAAAAGCACTGCCGGACA TCAGCGCTATCTCTGCTCTCATTGCCGTAAAACATGGCAACTACAGTTCACTTACACCGCCTCTCAGCCCGGTACGCACC AGAAAATCATTGATATGGCCATGAATGGCGTCGGATGTCGCGCCAGCGCACGCATTATGGGCGTTGGCCTCAACACGGTT TTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA
Upstream 100 bases:
>100_bases AGACAGGAAATAATAAAAACAGCGCCCCGCAATGGTGCGAAAATGGGTAATGCTGCCAACTTACTGATTTAGTGTATGAT GGTGATTTTAAGGTGCTTGC
Downstream 100 bases:
>100_bases CCTCGCGCATACAACCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACATTGGGGCTACGTCGGTGCTAAATCA CGTCAGCGCTGGCTGTTTTA
Product: IS1 orfA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTV LRHLKNSGRSR
Sequences:
>Translated_91_residues MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTV LRHLKNSGRSR >Mature_90_residues ASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVL RHLKNSGRSR
Specific function: Absolutely required for transposition of IS1 [H]
COG id: COG3677
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IS1 elements insA family [H]
Homologues:
Organism=Escherichia coli, GI1790747, Length=91, Percent_Identity=97.8021978021978, Blast_Score=184, Evalue=1e-48, Organism=Escherichia coli, GI1789852, Length=91, Percent_Identity=94.5054945054945, Blast_Score=184, Evalue=1e-48, Organism=Escherichia coli, GI1788204, Length=91, Percent_Identity=94.5054945054945, Blast_Score=184, Evalue=1e-48, Organism=Escherichia coli, GI1786204, Length=91, Percent_Identity=94.5054945054945, Blast_Score=184, Evalue=1e-48, Organism=Escherichia coli, GI87081814, Length=91, Percent_Identity=93.4065934065934, Blast_Score=182, Evalue=3e-48, Organism=Escherichia coli, GI1786471, Length=91, Percent_Identity=93.4065934065934, Blast_Score=182, Evalue=3e-48, Organism=Escherichia coli, GI1786460, Length=91, Percent_Identity=93.4065934065934, Blast_Score=182, Evalue=3e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012287 - InterPro: IPR003220 [H]
Pfam domain/function: PF03811 Ins_element1 [H]
EC number: NA
Molecular weight: Translated: 9938; Mature: 9806
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMA CCCEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHH MNGVGCRASARIMGVGLNTVLRHLKNSGRSR HCCCCCCCCCEEEEECHHHHHHHHHHCCCCC >Mature Secondary Structure ASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMA CCEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHH MNGVGCRASARIMGVGLNTVLRHLKNSGRSR HCCCCCCCCCEEEEECHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6265806 [H]