| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is prmA
Identifier: 30064590
GI number: 30064590
Start: 3386724
End: 3387605
Strand: Direct
Name: prmA
Synonym: S3514
Alternate gene names: 30064590
Gene position: 3386724-3387605 (Clockwise)
Preceding gene: 30064589
Following gene: 30064591
Centisome position: 73.63
GC content: 54.42
Gene sequence:
>882_bases ATGCCTTGGATCCAACTGAAACTGAACACCACCGGCGCGAACGCGGAAGATCTTAGCGATGCGCTGATGGAAGCGGGTGC CGTTTCTATCACTTTTCAGGATACCCACGATACGCCAGTATTTGAGCCGCTGCCGGGCGAAACGCGCCTGTGGGGCGACA CCGATGTGATTGGTCTGTTCGACGCTGAAACCGATATGAACGACGTGGTGGCGATTCTGGAAAACCATCCGCTGCTCGGC GCAGGCTTCGCGCATAAAATCGAACAACTAGAAGATAAAGACTGGGAGCGCGAATGGATGGATAATTTCCACCCGATGCG CTTTGGTGAACGACTGTGGATCTGCCCTAGCTGGCGTGATGTGCCGGACGAAAACGCCGTCAACGTGATGTTAGATCCAG GGCTGGCGTTTGGTACGGGTACCCATCCAACCACCTCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAA ACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGGCGCTGAAACTGGGTGCAGCAAAAGCCATTGGTAT TGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGCGTTTCTGACCGTCTGGAACTCTACT TACCGAAAGATCAGCCAGAAGAAATGAAAGCCGACGTGGTGGTCGCTAACATCCTTGCAGGCCCATTACGTGAACTGGCA CCGTTAATCAGCGTCCTGCCAGTTTCAGGCGGTTTGCTGGGCCTTTCCGGTATTCTGGCAAGCCAGGCAGAGAGCGTTTG TGAAGCTTATGCCGATAGCTTCGCACTGGACCCGGTCGTGGAAAAAGAAGAGTGGTGCCGTATTACCGGTCGTAAGAATT GA
Upstream 100 bases:
>100_bases CGTTACTACTAAGTTTGCTGGCTTTCCTGGTCGGAAACCGTTTCGGTACATCCGTCCCGCAAGCTACCGTTTTGACTACT GATAAATAAAGAGTTTTGCC
Downstream 100 bases:
>100_bases CCTTCGCATCGCCGTAGGGTGACGCGGGGCGAAGTGCGAGCAAGCTCACAAAAGGCACGTAAATTTGCCGATTATTTACG CAAATTTGCGTGCCAAAATT
Product: ribosomal protein L11 methyltransferase
Products: NA
Alternate protein names: L11 Mtase [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPLPGETRLWGDTDVIGLFDAETDMNDVVAILENHPLLG AGFAHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGK TVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQPEEMKADVVVANILAGPLRELA PLISVLPVSGGLLGLSGILASQAESVCEAYADSFALDPVVEKEEWCRITGRKN
Sequences:
>Translated_293_residues MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPLPGETRLWGDTDVIGLFDAETDMNDVVAILENHPLLG AGFAHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGK TVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQPEEMKADVVVANILAGPLRELA PLISVLPVSGGLLGLSGILASQAESVCEAYADSFALDPVVEKEEWCRITGRKN >Mature_292_residues PWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPLPGETRLWGDTDVIGLFDAETDMNDVVAILENHPLLGA GFAHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGKT VIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQPEEMKADVVVANILAGPLRELAP LISVLPVSGGLLGLSGILASQAESVCEAYADSFALDPVVEKEEWCRITGRKN
Specific function: Methylates ribosomal protein L11 [H]
COG id: COG2264
COG function: function code J; Ribosomal protein L11 methylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]
Homologues:
Organism=Escherichia coli, GI2367208, Length=293, Percent_Identity=100, Blast_Score=596, Evalue=1e-172,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010456 - InterPro: IPR004498 [H]
Pfam domain/function: PF06325 PrmA [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 31877; Mature: 31746
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPLPGETRLWGDTDVIGLF CCEEEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEECCCCCEEEEE DAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRD ECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCCCC VPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGKTVIDFGCGSGILAIAALKLG CCCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC AAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQPEEMKADVVVANILAGPLRELA CCEEEECCCCHHHHHCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH PLISVLPVSGGLLGLSGILASQAESVCEAYADSFALDPVVEKEEWCRITGRKN HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure PWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPLPGETRLWGDTDVIGLF CEEEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEECCCCCEEEEE DAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRD ECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCCCC VPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGKTVIDFGCGSGILAIAALKLG CCCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC AAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQPEEMKADVVVANILAGPLRELA CCEEEECCCCHHHHHCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH PLISVLPVSGGLLGLSGILASQAESVCEAYADSFALDPVVEKEEWCRITGRKN HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]
General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA