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The map label for this gene is yhdT

Identifier: 30064588

GI number: 30064588

Start: 3385029

End: 3385271

Strand: Direct

Name: yhdT

Synonym: S3512

Alternate gene names: 30064588

Gene position: 3385029-3385271 (Clockwise)

Preceding gene: 30064587

Following gene: 30064589

Centisome position: 73.6

GC content: 53.91

Gene sequence:

>243_bases
ATGGACACTCGTTTTGTTCAGGCCCATAAAGAGGCCCGCTGGGCGCTGGGGCTGACCCTTTTGTATCTGGCAGTTTGGTT
AGTAGACGCTTACTTACCTGGCGTTGCCCCCGGTTTTACCGGCTTTCCGCGCTGGTTTGAGATGGCCTGCATCCTGACGC
CGCTACTGTTTATTGGACTGTGCTGGGCGATGGTGAAATTTATCTATCGCGATATCCCACTGGAGGATGACGATGCAGCT
TGA

Upstream 100 bases:

>100_bases
AAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCTCGCTTTCT
TCACCCATCAGGGACAAAAA

Downstream 100 bases:

>100_bases
AGTAATTCTACCGCTGGTCGCCTATCTGGTGGTGGTGTTCGGTATCTCGGTTTATGCGATGCGTAAACGGAGCACCGGCA
CCTTCCTTAATGAGTATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MDTRFVQAHKEARWALGLTLLYLAVWLVDAYLPGVAPGFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA

Sequences:

>Translated_80_residues
MDTRFVQAHKEARWALGLTLLYLAVWLVDAYLPGVAPGFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA
>Mature_80_residues
MDTRFVQAHKEARWALGLTLLYLAVWLVDAYLPGVAPGFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA

Specific function: Unknown

COG id: COG3924

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0974B [H]

Homologues:

Organism=Escherichia coli, GI1789655, Length=80, Percent_Identity=97.5, Blast_Score=159, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010398
- ProDom:   PD745092 [H]

Pfam domain/function: PF06196 DUF997 [H]

EC number: NA

Molecular weight: Translated: 9152; Mature: 9152

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRFVQAHKEARWALGLTLLYLAVWLVDAYLPGVAPGFTGFPRWFEMACILTPLLFIGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CWAMVKFIYRDIPLEDDDAA
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDTRFVQAHKEARWALGLTLLYLAVWLVDAYLPGVAPGFTGFPRWFEMACILTPLLFIGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CWAMVKFIYRDIPLEDDDAA
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2193919; 9278503 [H]