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The map label for this gene is yhcB

Identifier: 30064566

GI number: 30064566

Start: 3358146

End: 3358544

Strand: Direct

Name: yhcB

Synonym: S3488

Alternate gene names: 30064566

Gene position: 3358146-3358544 (Clockwise)

Preceding gene: 30064560

Following gene: 30064567

Centisome position: 73.01

GC content: 54.64

Gene sequence:

>399_bases
ATGACCTGGGAATATGCGCTAATTGGGTTAGTCGTCGGCATCATTATTGGTGCTGTGGCCATGCGTTTTGGTAATCGTAA
ACTACGCCAGCAACAGGCGTTGCAGTACGAACTGGAAAAGAATAAAGCTGAACTGGACGAGTATCGCGAAGAGCTGGTTA
GCCACTTTGCCCGCAGCGCGGAATTACTGGATACCATGGCGCACGACTATCGCCAGCTGTATCAGCACATGGCAAAAAGC
TCCAGCAGCCTGCTGCCGGAACTGTCTGCTGAAGCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGA
TCAGGCACCGGTGCAGGTGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAA

Upstream 100 bases:

>100_bases
TCCACTTCTGTGGAATTAACGGTTATAGTGGCATAATCAGCCGCAGGCATGGAGCCTGAAGCCAACACCCTACGGAAACA
AAAGACAACGGGAGATGTTC

Downstream 100 bases:

>100_bases
TTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAG
CCGTCTGAAAATTCAATAAC

Product: cytochrome d ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome bd-I oxidase subunit III [H]

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKS
SSSLLPELSAEANPFRNRLAESEASNDQAPVQVPRDYSEGASGLLRTGAKRD

Sequences:

>Translated_132_residues
MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKS
SSSLLPELSAEANPFRNRLAESEASNDQAPVQVPRDYSEGASGLLRTGAKRD
>Mature_131_residues
TWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKSS
SSLLPELSAEANPFRNRLAESEASNDQAPVQVPRDYSEGASGLLRTGAKRD

Specific function: Unknown

COG id: COG3105

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1628 [H]

Homologues:

Organism=Escherichia coli, GI87082232, Length=132, Percent_Identity=99.2424242424242, Blast_Score=270, Evalue=3e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009386 [H]

Pfam domain/function: PF06295 DUF1043 [H]

EC number: NA

Molecular weight: Translated: 14929; Mature: 14798

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVSHFARSA
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAESEASNDQAPVQVPRDYSEG
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
ASGLLRTGAKRD
HHHHHHCCCCCC
>Mature Secondary Structure 
TWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVSHFARSA
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAESEASNDQAPVQVPRDYSEG
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
ASGLLRTGAKRD
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]