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The map label for this gene is yraK

Identifier: 30064485

GI number: 30064485

Start: 3274664

End: 3275755

Strand: Direct

Name: yraK

Synonym: S3403

Alternate gene names: 30064485

Gene position: 3274664-3275755 (Clockwise)

Preceding gene: 30064482

Following gene: 30064487

Centisome position: 71.2

GC content: 47.89

Gene sequence:

>1092_bases
ATGAAAAGAGCGCCTCTTATAACAGGACTTTTGTTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGC
CGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGAC
GGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTT
GTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAA
AACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAA
AAAGCAGCACCGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGACACGTCTCGTTATGGACCCGTTAATATT
GGTGCAAATACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGATATTGCCGT
CATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGG
GAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCAGGGCGATGTTATTAAAGTTAATTTTGGATTCATCAATGGTCAG
AAGTTTACCACCCGCAATGCCATGCCAGACGGTTTTACTCCAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTC
AAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGGTAGTAGACCAGTACAACCTGGTCGCCAGGCGAA
GAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCAGAAC
GGTATCCTTCCCGTTGATCCTTCCGGGCATGGCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCT
GGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATGGTGCGGTAA

Upstream 100 bases:

>100_bases
CAGGCAGATCAACAATGTCAGTTTGCTTTTAGTACACCGGATTCAGAACCAACAACCTCTGTATTACAAGGCACAGCGCA
GTGCCATTAAGGATAAAAAA

Downstream 100 bases:

>100_bases
AAGAAGACGTTGCGTTTTGATTAACGCAACGCTTCGGCACTGTTACCCCTGCTGCTCCAGCGCATACTTATACAGCGCAT
TTTTCTTCACGCCATGAATT

Product: putative fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKL
VYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKSSTVYSAATQTGVCQGDTSRYGPVNI
GANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQN
GILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVMVR

Sequences:

>Translated_363_residues
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKL
VYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKSSTVYSAATQTGVCQGDTSRYGPVNI
GANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQN
GILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVMVR
>Mature_363_residues
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKL
VYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKSSTVYSAATQTGVCQGDTSRYGPVNI
GANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQN
GILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVMVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1789534, Length=363, Percent_Identity=99.1735537190083, Blast_Score=734, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38500; Mature: 38500

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSAT
CCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEECCCCCCCCCEEEEEE
LSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTT
ECCCCEEEEEECCCCCEEEEEEEEECCEEECCCCCCEEEECCCCEEEEEEECCCCCCCCC
DQVVSVNTRFTQIKSSTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTI
CCEEEECCEEEEEECCEEEEHHCCCCEECCCCCCCCCEEECCCCEEEEEEECCCCCCCCC
PKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
CCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCC
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVP
EEEECCCCCCCCCEEEEEEEECCCCHHHHCCEEEEEECCCCCCCCCHHHHEECCCCCCCC
DVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITV
CCEEEEEECCCCEEECCCCCCEEEECCCCCCEEEEEEEEEEEECCEECCCEECCEEEEEE
MVR
EEC
>Mature Secondary Structure
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSAT
CCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEECCCCCCCCCEEEEEE
LSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTT
ECCCCEEEEEECCCCCEEEEEEEEECCEEECCCCCCEEEECCCCEEEEEEECCCCCCCCC
DQVVSVNTRFTQIKSSTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTI
CCEEEECCEEEEEECCEEEEHHCCCCEECCCCCCCCCEEECCCCEEEEEEECCCCCCCCC
PKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
CCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCC
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVP
EEEECCCCCCCCCEEEEEEEECCCCHHHHCCEEEEEECCCCCCCCCHHHHEECCCCCCCC
DVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITV
CCEEEEEECCCCEEECCCCCCEEEECCCCCCEEEEEEEEEEEECCEECCCEECCEEEEEE
MVR
EEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]