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The map label for this gene is agaV

Identifier: 30064470

GI number: 30064470

Start: 3261857

End: 3262366

Strand: Direct

Name: agaV

Synonym: S3383

Alternate gene names: 30064470

Gene position: 3261857-3262366 (Clockwise)

Preceding gene: 30064469

Following gene: 30064471

Centisome position: 70.92

GC content: 50.39

Gene sequence:

>510_bases
GTGAAGGCCAATAAGCAAAACAAAGAGGAACATGCTATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCA
CGGTCAGGTCGGCGTTCAGTGGGTCGGATTTGCGGGGGCAAATCTGGTGCTGGTAGCCAACGATGAGGTTGCCGAAGATC
CGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGAC
AACATTCATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGG
TGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTG
TGGATGCGGGCGATATCGCAGCATTTAACGACCTGAAAGCCGCTGGGGTGGAATGCTTCGTTCAGGGCGTCCCGACAGAG
CCTGCTGTGGACCTCTTTAAATTACTTTGA

Upstream 100 bases:

>100_bases
CTGCAGTACGTGAAAGTTCGCTCCGGCGAGCTGCAACCGACGCCACGGGAACTCATTATAAACCATATTCAGGACATCCT
GGCGCAGTACCACACAGCCT

Downstream 100 bases:

>100_bases
GGGATTCATCATGGAAATCAGCCTGTTGCAGGCATTTGCGTTGGGCATTATCGCCTTTATCGCTGGCCTAGATATGTTTA
ACGGCTTAACCCATATGCAC

Product: PTS system N-acetylgalactosamine-specific transporter subunit IIB

Products: NA

Alternate protein names: EIIB-Aga'; PTS system N-acetylgalactosamine-specific EIIB component 2 [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKANKQNKEEHAMPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPVQQNLMEMVLAEGIAVRFWTLQKVID
NIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMHYANGKQQIAKTVSVDAGDIAAFNDLKAAGVECFVQGVPTE
PAVDLFKLL

Sequences:

>Translated_169_residues
MKANKQNKEEHAMPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPVQQNLMEMVLAEGIAVRFWTLQKVID
NIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMHYANGKQQIAKTVSVDAGDIAAFNDLKAAGVECFVQGVPTE
PAVDLFKLL
>Mature_169_residues
MKANKQNKEEHAMPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPVQQNLMEMVLAEGIAVRFWTLQKVID
NIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMHYANGKQQIAKTVSVDAGDIAAFNDLKAAGVECFVQGVPTE
PAVDLFKLL

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG3444

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI87082217, Length=157, Percent_Identity=99.3630573248408, Blast_Score=318, Evalue=1e-88,
Organism=Escherichia coli, GI1789527, Length=146, Percent_Identity=47.945205479452, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1788120, Length=157, Percent_Identity=38.2165605095541, Blast_Score=107, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004720
- InterPro:   IPR018455 [H]

Pfam domain/function: PF03830 PTSIIB_sorb [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 18466; Mature: 18466

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS51101 PTS_EIIB_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANKQNKEEHAMPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPVQQNLM
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCHHCCHHHHHHH
EMVLAEGIAVRFWTLQKVIDNIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMH
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCEEEEECCCEE
YANGKQQIAKTVSVDAGDIAAFNDLKAAGVECFVQGVPTEPAVDLFKLL
ECCCHHHHHHHHCCCCCCCHHHHHHHHHCHHHEEECCCCCHHHHHHHHC
>Mature Secondary Structure
MKANKQNKEEHAMPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPVQQNLM
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCHHCCHHHHHHH
EMVLAEGIAVRFWTLQKVIDNIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMH
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCEEEEECCCEE
YANGKQQIAKTVSVDAGDIAAFNDLKAAGVECFVQGVPTEPAVDLFKLL
ECCCHHHHHHHHCCCCCCCHHHHHHHHHCHHHEEECCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 8932697 [H]