| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is exuT
Identifier: 30064436
GI number: 30064436
Start: 3224314
End: 3225612
Strand: Direct
Name: exuT
Synonym: S3340
Alternate gene names: 30064436
Gene position: 3224314-3225612 (Clockwise)
Preceding gene: 30064432
Following gene: 30064439
Centisome position: 70.1
GC content: 54.35
Gene sequence:
>1299_bases ATGCGTAAAATTAAAGGGTTACGTTGGTATATGATCGCACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAA CACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCT ATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTACGAAAATCGGTTATGCAATG TTTGCTGTGCTGTGGGCCGTGTTCTGTGGTGCAACCGCGCTGGCAGGTAGCTGGGGTGGCCTAGCTGTTGCTCGTGGTGC GGTCGGTGCCGCGGAAGCAGCGATGATCCCGGCGGGTCTGAAAGCCAGCTCCGAATGGTTCCCGGCGAAAGAGCGTTCCA TCGCAGTAGGCTACTTTAACGTAGGTTCTTCGATTGGTGCGATGATTGCGCCGCCGCTGGTGGTATGGGCAATCGTGATG CACAGCTGGCAGATGGCATTTATCATCTCCGGTGCATTGAGCTTTATCTGGGCGATGGCATGGCTGATTTTCTATAAACA TCCGCGCGACCAGAAGCATCTGACCGATGAAGAACGCGACTATATTATTAATGGTCAGGAAGCCCAGCACCAGGTGAGCA CGGCGAAGAAAATGTCCGTTGGTCAGATCCTGCGTAACCGTCAGTTCTGGGGTATCGCACTGCCGCGTTTCCTTGCAGAA CCGGCCTGGGGTACTTTTAACGCGTGGATCCCGCTGTTCATGTTTAAAGTTTACGGCTTTAACCTGAAAGAGATCGCGAT GTTCGCCTGGATGCCGATGCTGTTTGCTGACCTCGGTTGTATCCTCGGTGGTTACCTGCCGCCGCTGTTCCAGCGTTGGT TTGGTGTGAACCTGATCGTTTCCCGTAAGATGGTCGTAACGCTGGGTGCTGTGCTGATGATTGGCCCGGGTATGATCGGT CTGTTCACCAACCCGTATGTCGCAATTATGCTGCTGTGTATCGGTGGTTTTGCCCACCAGGCACTGTCTGGCGCGCTGAT TACGCTCTCTTCTGACGTGTTCGGTCGTAACGAAGTGGCGACGGCGAACGGTTTAACCGGGATGTCCGCATGGCTGGCAA GTACGCTGTTTGCGCTGGTTGTCGGTGCACTGGCTGACACCATCGGCTTCAGCCCGCTGTTCGCAGTTCTGGCAGTATTT GACCTGCTGGGTGCGCTGGTTATCTGGACCGTATTGCAGAACAAACCGGCGATTGAGGTGGCGCAGGAAACACATAACGA TCCCGCACCGCAACATTAA
Upstream 100 bases:
>100_bases GGTTTTTTTTTTCGGTTACCCGGTCGTAACTAACATCTTCAGCCTCTGGCGGGATGATGGCCGCGCTTCCTGCGGATATA ACAAAACGATGAGGTTTTAC
Downstream 100 bases:
>100_bases CGTTTAACGTAAGTTATAACGACGAAGCCGCCTTATCAGGCGGCTTCGTCGTTTATATAGAAAAAAGCGTTTGTCCGGTT TGCAGGGTTAATTGATGGTT
Product: transport protein of hexuronates
Products: galacturonate [Cytoplasm]; Proton [Cytoplasm]; glucuronate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNISTQQYSYIIAAYSAAYTVMQPVAGYVLDVLGTKIGYAM FAVLWAVFCGATALAGSWGGLAVARGAVGAAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVM HSWQMAFIISGALSFIWAMAWLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKMSVGQILRNRQFWGIALPRFLAE PAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFADLGCILGGYLPPLFQRWFGVNLIVSRKMVVTLGAVLMIGPGMIG LFTNPYVAIMLLCIGGFAHQALSGALITLSSDVFGRNEVATANGLTGMSAWLASTLFALVVGALADTIGFSPLFAVLAVF DLLGALVIWTVLQNKPAIEVAQETHNDPAPQH
Sequences:
>Translated_432_residues MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNISTQQYSYIIAAYSAAYTVMQPVAGYVLDVLGTKIGYAM FAVLWAVFCGATALAGSWGGLAVARGAVGAAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVM HSWQMAFIISGALSFIWAMAWLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKMSVGQILRNRQFWGIALPRFLAE PAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFADLGCILGGYLPPLFQRWFGVNLIVSRKMVVTLGAVLMIGPGMIG LFTNPYVAIMLLCIGGFAHQALSGALITLSSDVFGRNEVATANGLTGMSAWLASTLFALVVGALADTIGFSPLFAVLAVF DLLGALVIWTVLQNKPAIEVAQETHNDPAPQH >Mature_432_residues MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNISTQQYSYIIAAYSAAYTVMQPVAGYVLDVLGTKIGYAM FAVLWAVFCGATALAGSWGGLAVARGAVGAAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVM HSWQMAFIISGALSFIWAMAWLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKMSVGQILRNRQFWGIALPRFLAE PAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFADLGCILGGYLPPLFQRWFGVNLIVSRKMVVTLGAVLMIGPGMIG LFTNPYVAIMLLCIGGFAHQALSGALITLSSDVFGRNEVATANGLTGMSAWLASTLFALVVGALADTIGFSPLFAVLAVF DLLGALVIWTVLQNKPAIEVAQETHNDPAPQH
Specific function: Aldohexuronate transport system
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family
Homologues:
Organism=Homo sapiens, GI6912666, Length=383, Percent_Identity=23.2375979112272, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI148743791, Length=256, Percent_Identity=25, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI154800443, Length=409, Percent_Identity=23.7163814180929, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI2367193, Length=432, Percent_Identity=100, Blast_Score=871, Evalue=0.0, Organism=Escherichia coli, GI87082320, Length=410, Percent_Identity=26.8292682926829, Blast_Score=147, Evalue=9e-37, Organism=Escherichia coli, GI2367379, Length=310, Percent_Identity=28.3870967741935, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI1789515, Length=410, Percent_Identity=26.0975609756098, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789152, Length=350, Percent_Identity=24, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI87082071, Length=441, Percent_Identity=23.3560090702948, Blast_Score=86, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17552542, Length=318, Percent_Identity=24.2138364779874, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115533556, Length=270, Percent_Identity=23.3333333333333, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI115533554, Length=270, Percent_Identity=23.3333333333333, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI24580790, Length=243, Percent_Identity=24.6913580246914, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI45550460, Length=412, Percent_Identity=25.2427184466019, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24655255, Length=382, Percent_Identity=28.0104712041885, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24639764, Length=456, Percent_Identity=22.1491228070175, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI20129235, Length=360, Percent_Identity=25.2777777777778, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641682, Length=367, Percent_Identity=23.433242506812, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24658658, Length=301, Percent_Identity=24.2524916943522, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI28573708, Length=316, Percent_Identity=23.1012658227848, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI28573707, Length=316, Percent_Identity=23.1012658227848, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): EXUT_ECO57 (P0AA79)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: F85970 - PIR: G91125 - RefSeq: NP_289667.1 - RefSeq: NP_312002.1 - ProteinModelPortal: P0AA79 - EnsemblBacteria: EBESCT00000025446 - EnsemblBacteria: EBESCT00000058883 - GeneID: 916191 - GeneID: 958081 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z4446 - KEGG: ecs:ECs3975 - GeneTree: EBGT00050000008818 - HOGENOM: HBG338043 - OMA: ASTMFAL - ProtClustDB: CLSK880579 - BioCyc: ECOL83334:ECS3975-MONOMER - InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - TIGRFAMs: TIGR00893
Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter
EC number: NA
Molecular weight: Translated: 46893; Mature: 46893
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x14dc88ec)-; HASH(0x151e4410)-; HASH(0x151faafc)-; HASH(0x151f822c)-; HASH(0x151e956c)-; HASH(0x144d16a4)-; HASH(0x151c4b38)-; HASH(0x151ce6ac)-; HASH(0x12bb6e70)-; HASH(0x139b6e5c)-; HASH(0x151e9560)-; HASH(0x14be793c)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNISTQQYSYIIAAYSAAYTV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSWGGLAVARGAVGAAEAAMIPAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHCCCCC KASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVMHSWQMAFIISGALSFIWAMA CCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKMSVGQILRNRQFWGIALPRFLAE HHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC PAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFADLGCILGGYLPPLFQRWFGVNLIV CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH SRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCIGGFAHQALSGALITLSSDVFGRNEVA HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC TANGLTGMSAWLASTLFALVVGALADTIGFSPLFAVLAVFDLLGALVIWTVLQNKPAIEV CCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AQETHNDPAPQH HHHCCCCCCCCH >Mature Secondary Structure MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNISTQQYSYIIAAYSAAYTV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSWGGLAVARGAVGAAEAAMIPAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHCCCCC KASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVMHSWQMAFIISGALSFIWAMA CCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKMSVGQILRNRQFWGIALPRFLAE HHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC PAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFADLGCILGGYLPPLFQRWFGVNLIV CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH SRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCIGGFAHQALSGALITLSSDVFGRNEVA HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC TANGLTGMSAWLASTLFALVVGALADTIGFSPLFAVLAVFDLLGALVIWTVLQNKPAIEV CCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AQETHNDPAPQH HHHCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: galacturonate [Periplasm]; Proton [Periplasm]; glucuronate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + galacturonate [Periplasm] = galacturonate [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + glucuronate [Periplasm] = Proton [Cytoplasm] + glucuronate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796